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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102595197   tyrosine--tRNA ligase 1, cytoplasmic 
 sly-u.5   101247470   tyrosine--tRNA ligase 1, cytoplasmic 
 nta-r.1   107767155   tyrosine--tRNA ligase 1, cytoplasmic-like 
 nta-r.1   107774859   tyrosine--tRNA ligase 1, cytoplasmic 
 nta-r.1   107829772   tyrosine--tRNA ligase 1, cytoplasmic-like 
 ath-u.5   AT2G33840   Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial 
 ath-u.5   AT1G28350   Nucleotidylyl transferase superfamily protein 
 gma-u.5   100812345   putative tyrosine--tRNA ligase 1 
 gma-u.5   100806939   tyrosine--tRNA ligase 1, cytoplasmic 
 bra-r.6   103829015   tyrosine--tRNA ligase 2, cytoplasmic 
 bra-r.6   103835333   tyrosine--tRNA ligase 2, cytoplasmic 
 vvi-u.5   100251282   tyrosine--tRNA ligase 1, cytoplasmic 
 ppo-u.5   7491576   tyrosine--tRNA ligase 1, cytoplasmic 
 mtr-u.5   25483460   tyrosine--tRNA ligase 1, cytoplasmic 
 mtr-u.5   11434175   tyrosine--tRNA ligase 2, cytoplasmic 
 ghi-r.1   107906367   tyrosine--tRNA ligase 1, cytoplasmic 
 ghi-r.1   107958484   tyrosine--tRNA ligase 1, cytoplasmic 
 ghi-r.1   107947862   tyrosine--tRNA ligase 1, cytoplasmic 
 bna-r.1   106396472   tyrosine--tRNA ligase 2, cytoplasmic-like 
 bna-r.1   106381651   tyrosine--tRNA ligase 2, cytoplasmic 
 bna-r.1   106358059   tyrosine--tRNA ligase 2, cytoplasmic 
 cit-r.1   102629233   tyrosine--tRNA ligase 1, cytoplasmic 
 osa-u.5   4344663   tyrosine--tRNA ligase 1, cytoplasmic 
 osa-u.5   4344270   tyrosine--tRNA ligase 1, cytoplasmic 
 zma-u.5   100282839   Tyrosyl-tRNA synthetase 
 zma-u.5   100282315   tyrosyl-tRNA synthetase 
 tae-r.2   123157189   tyrosine--tRNA ligase 1, cytoplasmic 
 tae-r.2   123165343   tyrosine--tRNA ligase 1, cytoplasmic 
 hvu-r.1   123407602   tyrosine--tRNA ligase 1, cytoplasmic-like 
 sbi-r.1   110437380   tyrosine--tRNA ligase 1, cytoplasmic 
 sbi-r.1   8073415   tyrosine--tRNA ligase 1, cytoplasmic 
 bdi-r.1   100824796   tyrosine--tRNA ligase 1, cytoplasmic 
 bdi-r.1   100822969   tyrosine--tRNA ligase 1, cytoplasmic 
 cre-r.1   CHLRE_03g145727v5   uncharacterized protein 

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Top 50 coexpressed genes to 102595197 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102595197 (sot-r.1 coexpression data)

CoexMap"102595197"


sotLOC102595197 | Entrez gene ID : 102595197      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 3 2 2 2 1 1 2 3 3 1 2 2 2 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot00970 [list] [network] Aminoacyl-tRNA biosynthesis (82 genes)
GO BP
GO:0006437 [list] [network] tyrosyl-tRNA aminoacylation  (2 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4349 genes)  IEA  
GO MF
GO:0004831 [list] [network] tyrosine-tRNA ligase activity  (2 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2117 genes)  IEA  
Protein XP_006365507.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for XP_006365507.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for XP_006365507.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102595197
sly-u.5
for
101247470
nta-r.1
for
107767155
nta-r.1
for
107774859
nta-r.1
for
107829772
ath-u.5
for
AT2G33840
ath-u.5
for
AT1G28350
gma-u.5
for
100812345
gma-u.5
for
100806939
bra-r.6
for
103829015
bra-r.6
for
103835333
vvi-u.5
for
100251282
ppo-u.5
for
7491576
mtr-u.5
for
25483460
mtr-u.5
for
11434175
ghi-r.1
for
107906367
ghi-r.1
for
107958484
ghi-r.1
for
107947862
bna-r.1
for
106396472
bna-r.1
for
106381651
bna-r.1
for
106358059
cit-r.1
for
102629233
osa-u.5
for
4344663
osa-u.5
for
4344270
zma-u.5
for
100282839
zma-u.5
for
100282315
tae-r.2
for
123157189
tae-r.2
for
123165343
hvu-r.1
for
123407602
sbi-r.1
for
110437380
sbi-r.1
for
8073415
bdi-r.1
for
100824796
bdi-r.1
for
100822969
cre-r.1
for
CHLRE_03g145727v5


Ortholog ID: 4051
Species sot sly nta nta nta ath ath gma gma bra bra vvi ppo mtr mtr ghi ghi ghi bna bna bna cit osa osa zma zma tae hvu sbi sbi bdi bdi cre
Symbol LOC102595197 LOC101247470 LOC107767155 LOC107774859 LOC107829772 AT2G33840 AT1G28350 LOC100812345 LOC100806939 LOC103829015 LOC103835333 LOC100251282 LOC7491576 LOC25483460 LOC11434175 LOC107906367 LOC107958484 LOC107947862 LOC106396472 LOC106381651 LOC106358059 LOC102629233 LOC4344663 LOC9269094 LOC100282839 LOC100282315 LOC123147402 LOC123407602 LOC110437380 LOC8073415 LOC100824796 LOC100822969 CHLRE_03g145727v5
Function* tyrosine--tRNA ligase 1, cytoplasmic tyrosine--tRNA ligase 1, cytoplasmic tyrosine--tRNA ligase 1, cytoplasmic-like tyrosine--tRNA ligase 1, cytoplasmic tyrosine--tRNA ligase 1, cytoplasmic-like Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial Nucleotidylyl transferase superfamily protein putative tyrosine--tRNA ligase 1 tyrosine--tRNA ligase 1, cytoplasmic tyrosine--tRNA ligase 2, cytoplasmic tyrosine--tRNA ligase 2, cytoplasmic tyrosine--tRNA ligase 1, cytoplasmic tyrosine--tRNA ligase 1, cytoplasmic tyrosine--tRNA ligase 1, cytoplasmic tyrosine--tRNA ligase 2, cytoplasmic tyrosine--tRNA ligase 1, cytoplasmic tyrosine--tRNA ligase 1, cytoplasmic tyrosine--tRNA ligase 1, cytoplasmic tyrosine--tRNA ligase 2, cytoplasmic-like tyrosine--tRNA ligase 2, cytoplasmic tyrosine--tRNA ligase 2, cytoplasmic tyrosine--tRNA ligase 1, cytoplasmic tyrosine--tRNA ligase 1, cytoplasmic tyrosine--tRNA ligase 1, cytoplasmic Tyrosyl-tRNA synthetase tyrosyl-tRNA synthetase tyrosine--tRNA ligase 1, cytoplasmic tyrosine--tRNA ligase 1, cytoplasmic-like tyrosine--tRNA ligase 1, cytoplasmic tyrosine--tRNA ligase 1, cytoplasmic tyrosine--tRNA ligase 1, cytoplasmic tyrosine--tRNA ligase 1, cytoplasmic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00541 Biosynthesis of various nucleotide sugars 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma00970 Aminoacyl-tRNA biosynthesis 3
gma00010 Glycolysis / Gluconeogenesis 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 6
bra03010 Ribosome 3
bra03018 RNA degradation 3
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03010 Ribosome 2
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 5
ghi00670 One carbon pool by folate 4
ghi00230 Purine metabolism 2
ghi00270 Cysteine and methionine metabolism 2
ghi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 5
ghi00270 Cysteine and methionine metabolism 2
ghi00670 One carbon pool by folate 2
ghi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 6
cit03010 Ribosome 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 7
osa03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma00970 Aminoacyl-tRNA biosynthesis 3
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
hvu01230 Biosynthesis of amino acids 4
hvu00220 Arginine biosynthesis 3
hvu00250 Alanine, aspartate and glutamate metabolism 3
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 8
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102595197 101247470 107767155 107774859 107829772 817952 839731 100812345 100806939 103829015 103835333 100251282 7491576 25483460 11434175 107906367 107958484 107947862 106396472 106381651 106358059 102629233 4344663 9269094 100282839 100282315 123147402 123407602 110437380 8073415 100824796 100822969 5721249
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