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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102599420   proteasome subunit beta type-3-A 
 sly-u.5   101259528   proteasome subunit beta type-3-A 
 ath-u.5   PBC1   proteasome beta subunit C1 
 ath-u.5   PBC2   20S proteasome beta subunit C2 
 gma-u.5   100306084   putative proteasome beta subunit C1 
 gma-u.5   100499664   proteasome beta subunit C1 
 gma-u.5   100527027   20S proteasome beta subunit C1 
 vvi-u.5   100250625   proteasome subunit beta type-like 
 ppo-u.5   7460968   proteasome subunit beta type-3-A 
 ppo-u.5   7460354   proteasome subunit beta type-3-A 
 mtr-u.5   11445740   proteasome subunit beta type-3-A 
 mtr-u.5   11417396   proteasome subunit beta type-3-A 
 osa-u.5   4341637   proteasome subunit beta type-3-like 
 osa-u.5   4328517   proteasome subunit beta type-3-like 
 zma-u.5   100382784   uncharacterized LOC100382784 
 zma-u.5   100274112   uncharacterized LOC100274112 
 zma-u.5   100272320   Proteasome subunit beta type 

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Top 50 coexpressed genes to 102599420 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102599420 (sot-r.1 coexpression data)

CoexMap"102599420"


sotLOC102599420 | Entrez gene ID : 102599420      
Species sot sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi tae bna ghi
Paralog 1 1 2 3 1 2 2 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot03050 [list] [network] Proteasome (55 genes)
GO BP
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (107 genes)  IEA  
GO CC
GO:0019774 [list] [network] proteasome core complex, beta-subunit complex  (1 genes)  IEA  
GO:0005839 [list] [network] proteasome core complex  (25 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4349 genes)  IEA  
GO MF
Protein XP_006359316.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  cyto_E.R. 2,  nucl 1  (predict for XP_006359316.1)
Subcellular
localization
TargetP
scret 7,  other 3  (predict for XP_006359316.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102599420

.
sly-u.5
for
101259528

.
ath-u.5
for
PBC1

.
ath-u.5
for
PBC2

.
gma-u.5
for
100306084

.
gma-u.5
for
100499664

.
gma-u.5
for
100527027

.
vvi-u.5
for
100250625

.
ppo-u.5
for
7460968

.
ppo-u.5
for
7460354

.
mtr-u.5
for
11445740

.
mtr-u.5
for
11417396

.
osa-u.5
for
4341637

.
osa-u.5
for
4328517

.
zma-u.5
for
100382784

.
zma-u.5
for
100274112

.
zma-u.5
for
100272320

.


Ortholog ID: 3164
Species ath ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit bdi bdi nta nta
Symbol PBC2 PBC1 LOC100306084 LOC100527027 LOC101259528 LOC4328517 LOC4341637 LOC100382784 LOC100272320 LOC103853073 LOC103835733 LOC100250625 LOC7460354 LOC7460968 LOC11417396 LOC11445740 LOC123149572 LOC123136532 LOC123403355 LOC123411078 LOC121230380 LOC107951479 LOC106446603 LOC106396984 CHLRE_06g267500v5 LOC8079409 LOC8067705 LOC102599420 LOC102614137 LOC100831014 LOC100822862 LOC107826949 LOC107817251
Function* 20S proteasome beta subunit C2 proteasome beta subunit C1 putative proteasome beta subunit C1 20S proteasome beta subunit C1 proteasome subunit beta type-3-A proteasome subunit beta type-3-like proteasome subunit beta type-3-like uncharacterized LOC100382784 Proteasome subunit beta type proteasome subunit beta type-3-A proteasome subunit beta type-3-A proteasome subunit beta type-like proteasome subunit beta type-3-A proteasome subunit beta type-3-A proteasome subunit beta type-3-A proteasome subunit beta type-3-A proteasome subunit beta type-3 proteasome subunit beta type-3 proteasome subunit beta type-3 proteasome subunit beta type-3-like proteasome subunit beta type-3-A proteasome subunit beta type-3-A proteasome subunit beta type-3-A-like proteasome subunit beta type-3-A uncharacterized protein proteasome subunit beta type-3 proteasome subunit beta type-3 proteasome subunit beta type-3-A proteasome subunit beta type-3-A proteasome subunit beta type-3 proteasome subunit beta type-3 proteasome subunit beta type-3-A proteasome subunit beta type-3-A-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 9
gma00190 Oxidative phosphorylation 3
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 13
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 15
vvi03420 Nucleotide excision repair 2
vvi04120 Ubiquitin mediated proteolysis 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo03015 mRNA surveillance pathway 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 10
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 4
tae03420 Nucleotide excision repair 2
tae04141 Protein processing in endoplasmic reticulum 2
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04130 SNARE interactions in vesicular transport 2
hvu03420 Nucleotide excision repair 2
hvu00510 N-Glycan biosynthesis 2
hvu00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 10
hvu00010 Glycolysis / Gluconeogenesis 2
hvu00030 Pentose phosphate pathway 2
hvu00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 10
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 18
ghi00030 Pentose phosphate pathway 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 9
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna03020 RNA polymerase 3
bna03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 9
sbi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 10
sbi00071 Fatty acid degradation 2
sbi00280 Valine, leucine and isoleucine degradation 2
sbi00310 Lysine degradation 2
sbi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 14
cit03040 Spliceosome 2
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 6
bdi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 10
nta04120 Ubiquitin mediated proteolysis 2
nta00020 Citrate cycle (TCA cycle) 2
nta00270 Cysteine and methionine metabolism 2
nta00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 10
nta04120 Ubiquitin mediated proteolysis 2
nta00190 Oxidative phosphorylation 2
nta00020 Citrate cycle (TCA cycle) 2
nta00270 Cysteine and methionine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844080 838776 100306084 100527027 101259528 4328517 4341637 100382784 100272320 103853073 103835733 100250625 7460354 7460968 11417396 11445740 123149572 123136532 123403355 123411078 121230380 107951479 106446603 106396984 5721912 8079409 8067705 102599420 102614137 100831014 100822862 107826949 107817251
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