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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102600166   isoleucine--tRNA ligase, cytoplasmic 
 sly-u.5   101253854   isoleucine--tRNA ligase, cytoplasmic 
 nta-r.1   107819118   isoleucine--tRNA ligase, cytoplasmic-like 
 nta-r.1   107765258   isoleucine--tRNA ligase, cytoplasmic 
 ath-u.5   AT4G10320   tRNA synthetase class I (I, L, M and V) family protein 
 gma-u.5   100809292   isoleucine--tRNA ligase, cytoplasmic 
 gma-u.5   100791830   isoleucine--tRNA ligase, cytoplasmic 
 bra-r.6   103861295   isoleucine--tRNA ligase, cytoplasmic-like 
 bra-r.6   103864125   isoleucine--tRNA ligase, cytoplasmic 
 vvi-u.5   100250847   isoleucine--tRNA ligase, cytoplasmic 
 ppo-u.5   18106949   isoleucine--tRNA ligase, cytoplasmic 
 ppo-u.5   7469599   isoleucine--tRNA ligase, cytoplasmic 
 mtr-u.5   11439215   isoleucine--tRNA ligase, cytoplasmic 
 ghi-r.1   107938948   isoleucine--tRNA ligase, cytoplasmic 
 ghi-r.1   107939671   isoleucine--tRNA ligase, cytoplasmic 
 bna-r.1   106358007   isoleucine--tRNA ligase, cytoplasmic-like 
 bna-r.1   106442768   isoleucine--tRNA ligase, cytoplasmic 
 bna-r.1   106446320   isoleucine--tRNA ligase, cytoplasmic 
 cit-r.1   102621177   isoleucine--tRNA ligase, cytoplasmic 
 osa-u.5   9270869   isoleucine--tRNA ligase, cytoplasmic 
 zma-u.5   100384866   isoleucine--tRNA ligase, cytoplasmic 
 zma-u.5   100273774   Isoleucine--tRNA ligase cytoplasmic 
 tae-r.2   123169893   isoleucine--tRNA ligase, cytoplasmic 
 tae-r.2   123155529   isoleucine--tRNA ligase, cytoplasmic 
 tae-r.2   123149530   isoleucine--tRNA ligase, cytoplasmic 
 hvu-r.1   123407557   isoleucine--tRNA ligase, cytoplasmic 
 sbi-r.1   8058407   isoleucine--tRNA ligase, cytoplasmic 
 sbi-r.1   8082695   isoleucine--tRNA ligase, cytoplasmic 
 bdi-r.1   100833154   isoleucine--tRNA ligase, cytoplasmic 
 cre-r.1   CHLRE_16g651750v5   uncharacterized protein 

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Top 50 coexpressed genes to 102600166 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102600166 (sot-r.1 coexpression data)

CoexMap""


sotLOC102600166 | Entrez gene ID : 102600166      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 2 1 2 2 1 2 1 2 3 1 1 2 3 1 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function isoleucine--tRNA ligase, cytoplasmic
KEGG sot00970 [list] [network] Aminoacyl-tRNA biosynthesis (82 genes)
GO BP
GO:0006428 [list] [network] isoleucyl-tRNA aminoacylation  (2 genes)  IEA  
GO CC
GO MF
GO:0004822 [list] [network] isoleucine-tRNA ligase activity  (2 genes)  IEA  
GO:0002161 [list] [network] aminoacyl-tRNA deacylase activity  (14 genes)  IEA  
GO:0000049 [list] [network] tRNA binding  (27 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2117 genes)  IEA  
Protein XP_006352368.1 [sequence] [blastp]
XP_006352369.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 2,  cysk_nucl 2  (predict for XP_006352368.1)
cyto 6,  chlo 1,  nucl 1  (predict for XP_006352369.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006352368.1)
other 8  (predict for XP_006352369.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102600166
sly-u.5
for
101253854
nta-r.1
for
107819118
nta-r.1
for
107765258
ath-u.5
for
AT4G10320
gma-u.5
for
100809292
gma-u.5
for
100791830
bra-r.6
for
103861295
bra-r.6
for
103864125
vvi-u.5
for
100250847
ppo-u.5
for
18106949
ppo-u.5
for
7469599
mtr-u.5
for
11439215
ghi-r.1
for
107938948
ghi-r.1
for
107939671
bna-r.1
for
106358007
bna-r.1
for
106442768
bna-r.1
for
106446320
cit-r.1
for
102621177
osa-u.5
for
9270869
zma-u.5
for
100384866
zma-u.5
for
100273774
tae-r.2
for
123169893
tae-r.2
for
123155529
tae-r.2
for
123149530
hvu-r.1
for
123407557
sbi-r.1
for
8058407
sbi-r.1
for
8082695
bdi-r.1
for
100833154
cre-r.1
for
CHLRE_16g651750v5

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Ortholog ID: 7646
Species sot sly nta nta ath gma gma bra bra vvi ppo ppo mtr ghi ghi bna bna bna cit osa zma zma tae tae tae hvu sbi sbi bdi cre
Symbol LOC102600166 LOC101253854 LOC107819118 LOC107765258 AT4G10320 LOC100809292 LOC100791830 LOC103861295 LOC103864125 LOC100250847 LOC18106949 LOC7469599 LOC11439215 LOC107938948 LOC107939671 LOC106358007 LOC106442768 LOC106446320 LOC102621177 LOC9270869 LOC100384866 LOC100273774 LOC123169893 LOC123155529 LOC123149530 LOC123407557 LOC8058407 LOC8082695 LOC100833154 CHLRE_16g651750v5
Function* isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic-like isoleucine--tRNA ligase, cytoplasmic tRNA synthetase class I (I, L, M and V) family protein isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic-like isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic-like isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic Isoleucine--tRNA ligase cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03440 Homologous recombination 2
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 6
sly03040 Spliceosome 3
sly00970 Aminoacyl-tRNA biosynthesis 3
sly03008 Ribosome biogenesis in eukaryotes 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath03040 Spliceosome 3
ath00970 Aminoacyl-tRNA biosynthesis 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma03018 RNA degradation 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00020 Citrate cycle (TCA cycle) 2
gma00785 Lipoic acid metabolism 2
gma01200 Carbon metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03020 RNA polymerase 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 7
bra03010 Ribosome 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04142 Lysosome 2
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03018 RNA degradation 4
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr04142 Lysosome 2
mtr04141 Protein processing in endoplasmic reticulum 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03440 Homologous recombination 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03440 Homologous recombination 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
cit03040 Spliceosome 2
cit03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 10
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 5
zma00970 Aminoacyl-tRNA biosynthesis 4
zma03015 mRNA surveillance pathway 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 5
zma03008 Ribosome biogenesis in eukaryotes 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 7
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 8
tae03008 Ribosome biogenesis in eukaryotes 4
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 8
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 9
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 6
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102600166 101253854 107819118 107765258 826624 100809292 100791830 103861295 103864125 100250847 18106949 7469599 11439215 107938948 107939671 106358007 106442768 106446320 102621177 9270869 100384866 100273774 123169893 123155529 123149530 123407557 8058407 8082695 100833154 5723789
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