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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102600402   vacuolar protein sorting-associated protein 55 homolog 
 sot-r.1   102593735   vacuolar protein sorting-associated protein 55 homolog 
 sly-u.5   101245787   vacuolar protein sorting-associated protein 55 homolog 
 sly-u.5   101260847   vacuolar protein sorting-associated protein 55 homolog 
 nta-r.1   107815588   vacuolar protein sorting-associated protein 55 homolog 
 nta-r.1   107818791   vacuolar protein sorting-associated protein 55 homolog 
 nta-r.1   107806774   vacuolar protein sorting-associated protein 55 homolog 
 ath-u.5   AT3G11530   Vacuolar protein sorting 55 (VPS55) family protein 
 ath-u.5   AT1G32410   Vacuolar protein sorting 55 (VPS55) family protein 
 gma-u.5   100306202   uncharacterized LOC100306202 
 gma-u.5   100306519   vps55 superfamily protein 
 gma-u.5   100500037   uncharacterized LOC100500037 
 bra-r.6   103859395   vacuolar protein sorting-associated protein 55 homolog 
 bra-r.6   103840162   vacuolar protein sorting-associated protein 55 homolog 
 bra-r.6   103870336   vacuolar protein sorting-associated protein 55 homolog 
 vvi-u.5   100248887   vacuolar protein sorting-associated protein 55-like 
 vvi-u.5   100249425   vacuolar protein sorting-associated protein 55 homolog 
 ppo-u.5   18094209   vacuolar protein sorting-associated protein 55 homolog 
 ppo-u.5   7466022   vacuolar protein sorting-associated protein 55 homolog 
 ppo-u.5   18096930   vacuolar protein sorting-associated protein 55 homolog 
 mtr-u.5   25499408   vacuolar protein sorting-associated protein 55 homolog 
 mtr-u.5   11436518   vacuolar protein sorting-associated protein 55 homolog 
 ghi-r.1   121223376   vacuolar protein sorting-associated protein 55 homolog 
 ghi-r.1   107933731   vacuolar protein sorting-associated protein 55 homolog 
 ghi-r.1   107929807   vacuolar protein sorting-associated protein 55 homolog 
 bna-r.1   106367131   vacuolar protein sorting-associated protein 55 homolog 
 bna-r.1   106349351   vacuolar protein sorting-associated protein 55 homolog 
 bna-r.1   111215741   vacuolar protein sorting-associated protein 55 homolog 
 cit-r.1   102612376   vacuolar protein sorting-associated protein 55 homolog 
 cit-r.1   102621305   vacuolar protein sorting-associated protein 55 homolog 
 osa-u.5   4331048   vacuolar protein sorting-associated protein 55 homolog 
 osa-u.5   4324475   vacuolar protein sorting-associated protein 55 homolog 
 zma-u.5   100282432   uncharacterized LOC100282432 
 zma-u.5   100281250   uncharacterized LOC100281250 
 tae-r.2   123139328   vacuolar protein sorting-associated protein 55 homolog 
 tae-r.2   123131244   vacuolar protein sorting-associated protein 55 homolog 
 tae-r.2   123080928   vacuolar protein sorting-associated protein 55 homolog 
 hvu-r.1   123402179   vacuolar protein sorting-associated protein 55 homolog 
 sbi-r.1   8074125   vacuolar protein sorting-associated protein 55 homolog 
 sbi-r.1   8084658   vacuolar protein sorting-associated protein 55 homolog 
 bdi-r.1   100828070   vacuolar protein sorting-associated protein 55 homolog 
 bdi-r.1   100830194   vacuolar protein sorting-associated protein 55 homolog 
 bdi-r.1   100845087   vacuolar protein sorting-associated protein 55 homolog 
 cre-r.1   CHLRE_12g491150v5   uncharacterized protein 

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Top 50 coexpressed genes to 102600402 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102600402 (sot-r.1 coexpression data)

CoexMap"102600402"


sotLOC102600402 | Entrez gene ID : 102600402      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 2 3 2 3 3 2 3 2 3 3 2 2 2 3 1 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032511 [list] [network] late endosome to vacuole transport via multivesicular body sorting pathway  (27 genes)  IEA  
GO CC
GO:0005768 [list] [network] endosome  (136 genes)  IEA  
GO MF
Protein XP_006358583.1 [sequence] [blastp]
XP_015169500.1 [sequence] [blastp]
XP_015169501.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 5,  nucl 2,  plas 1,  extr 1  (predict for XP_006358583.1)
vacu 5,  nucl 2,  plas 1,  extr 1  (predict for XP_015169500.1)
vacu 5,  nucl 2,  plas 1,  extr 1  (predict for XP_015169501.1)
Subcellular
localization
TargetP
scret 3,  mito 3  (predict for XP_006358583.1)
scret 3,  mito 3  (predict for XP_015169500.1)
scret 3,  mito 3  (predict for XP_015169501.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102600402
sot-r.1
for
102593735
sly-u.5
for
101245787
sly-u.5
for
101260847
nta-r.1
for
107815588
nta-r.1
for
107818791
nta-r.1
for
107806774
ath-u.5
for
AT3G11530
ath-u.5
for
AT1G32410
gma-u.5
for
100306202
gma-u.5
for
100306519
gma-u.5
for
100500037
bra-r.6
for
103859395
bra-r.6
for
103840162
bra-r.6
for
103870336
vvi-u.5
for
100248887
vvi-u.5
for
100249425
ppo-u.5
for
18094209
ppo-u.5
for
7466022
ppo-u.5
for
18096930
mtr-u.5
for
25499408
mtr-u.5
for
11436518
ghi-r.1
for
121223376
ghi-r.1
for
107933731
ghi-r.1
for
107929807
bna-r.1
for
106367131
bna-r.1
for
106349351
bna-r.1
for
111215741
cit-r.1
for
102612376
cit-r.1
for
102621305
osa-u.5
for
4331048
osa-u.5
for
4324475
zma-u.5
for
100282432
zma-u.5
for
100281250
tae-r.2
for
123139328
tae-r.2
for
123131244
tae-r.2
for
123080928
hvu-r.1
for
123402179
sbi-r.1
for
8074125
sbi-r.1
for
8084658
bdi-r.1
for
100828070
bdi-r.1
for
100830194
bdi-r.1
for
100845087
cre-r.1
for
CHLRE_12g491150v5


Ortholog ID: 2724
Species sot sot sly sly nta nta nta ath ath gma gma gma bra bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna cit cit osa osa zma zma tae tae tae hvu sbi sbi bdi bdi bdi cre
Symbol LOC102600402 LOC102593735 LOC101245787 LOC101260847 LOC107815588 LOC107818791 LOC107806774 AT3G11530 AT1G32410 LOC100306202 LOC100500037 LOC100800586 LOC103859395 LOC103840162 LOC103870336 LOC100248887 LOC100249425 LOC18094209 LOC7466022 LOC18096930 LOC25499408 LOC11436518 LOC107933731 LOC107886380 LOC107896332 LOC106349351 LOC106361644 LOC106452484 LOC102612376 LOC102621305 LOC4331048 LOC4324475 LOC100282432 LOC100281250 LOC123139328 LOC123131244 LOC123063608 LOC123445641 LOC8074125 LOC8084658 LOC100828070 LOC100830194 LOC100845087 CHLRE_12g491150v5
Function* vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog Vacuolar protein sorting 55 (VPS55) family protein Vacuolar protein sorting 55 (VPS55) family protein uncharacterized LOC100306202 uncharacterized LOC100500037 vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55-like vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog uncharacterized LOC100282432 uncharacterized LOC100281250 vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog vacuolar protein sorting-associated protein 55 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 5
sot04145 Phagosome 3
sot04120 Ubiquitin mediated proteolysis 3
sot03272 Virion - Hepatitis viruses 2
sot04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 4
nta03272 Virion - Hepatitis viruses 4
nta04144 Endocytosis 4
nta04130 SNARE interactions in vesicular transport 4
nta00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 6
ath00190 Oxidative phosphorylation 5
ath04142 Lysosome 5
ath04144 Endocytosis 3
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 3
bra04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 4
vvi04145 Phagosome 3
vvi04142 Lysosome 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo00190 Oxidative phosphorylation 2
ppo04145 Phagosome 2
ppo03020 RNA polymerase 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 5
mtr04145 Phagosome 5
mtr04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
bna04145 Phagosome 4
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
bna04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 4
bna04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 5
osa04144 Endocytosis 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 5
tae03420 Nucleotide excision repair 3
tae04120 Ubiquitin mediated proteolysis 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae04144 Endocytosis 3
tae04145 Phagosome 3
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 3
tae04146 Peroxisome 3
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04145 Phagosome 5
hvu00190 Oxidative phosphorylation 3
hvu04142 Lysosome 2
hvu04144 Endocytosis 2
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 3
cre04130 SNARE interactions in vesicular transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102600402 102593735 101245787 101260847 107815588 107818791 107806774 820326 840134 100306202 100500037 100800586 103859395 103840162 103870336 100248887 100249425 18094209 7466022 18096930 25499408 11436518 107933731 107886380 107896332 106349351 106361644 106452484 102612376 102621305 4331048 4324475 100282432 100281250 123139328 123131244 123063608 123445641 8074125 8084658 100828070 100830194 100845087 5716714
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