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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102600595   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like 
 sot-r.1   102585508   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like 
 sly-u.5   ribA   GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone-4-phosphate synthase 
 sly-u.5   101263963   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like 
 nta-r.1   107809151   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like 
 nta-r.1   107789772   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 nta-r.1   107780053   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like 
 ath-u.5   RIBA2   riboflavin biosynthesis protein 
 ath-u.5   GCH   GTP cyclohydrolase II 
 gma-u.5   100791686   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 gma-u.5   100778763   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 gma-u.5   100782332   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 bra-r.6   103837523   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 bra-r.6   103837892   monofunctional riboflavin biosynthesis protein RIBA 2, chloroplastic 
 bra-r.6   103873853   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 vvi-u.5   100248717   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 vvi-u.5   100241208   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 ppo-u.5   7466784   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 ppo-u.5   18107058   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 ppo-u.5   18095218   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 mtr-u.5   11418835   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 mtr-u.5   11426139   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 ghi-r.1   107898789   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 ghi-r.1   107908940   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 ghi-r.1   121221463   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 bna-r.1   106368672   monofunctional riboflavin biosynthesis protein RIBA 2, chloroplastic 
 bna-r.1   106348065   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 bna-r.1   106357647   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 cit-r.1   102626341   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 cit-r.1   102621261   bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like 
 osa-u.5   9270160   probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 osa-u.5   4329733   probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic 
 zma-u.5   100383821   Bifunctional riboflavin biosynthesis protein RIBA 1 chloroplastic 
 zma-u.5   100304324   Bifunctional riboflavin biosynthesis protein RIBA 1 chloroplastic 
 tae-r.2   123127569   probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic 
 tae-r.2   123137212   probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic 
 tae-r.2   123144654   probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic 
 hvu-r.1   123401666   probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic 
 hvu-r.1   123408293   probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 sbi-r.1   8055385   probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 sbi-r.1   8072615   probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic 
 bdi-r.1   100844595   probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 
 bdi-r.1   100836975   probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic 
 bdi-r.1   100832262   probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic 
 cre-r.1   CHLRE_14g620350v5   uncharacterized protein 

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Top 50 coexpressed genes to 102600595 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102600595 (sot-r.1 coexpression data)

CoexMap"102600595"


sotLOC102600595 | Entrez gene ID : 102600595      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 2 3 2 3 3 2 3 2 3 3 2 2 2 3 2 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot00740 [list] [network] Riboflavin metabolism (20 genes)
sot00790 [list] [network] Folate biosynthesis (28 genes)
sot01240 [list] [network] Biosynthesis of cofactors (264 genes)
GO BP
GO:0009231 [list] [network] riboflavin biosynthetic process  (11 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (606 genes)  IEA  
GO MF
GO:0003935 [list] [network] GTP cyclohydrolase II activity  (3 genes)  IEA  
GO:0008686 [list] [network] 3,4-dihydroxy-2-butanone-4-phosphate synthase activity  (3 genes)  IEA  
Protein XP_006351756.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  vacu 2,  nucl 1,  mito 1,  plas 1,  nucl_plas 1,  mito_plas 1  (predict for XP_006351756.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_006351756.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102600595
sot-r.1
for
102585508
sly-u.5
for
ribA
sly-u.5
for
101263963
nta-r.1
for
107809151
nta-r.1
for
107789772
nta-r.1
for
107780053
ath-u.5
for
RIBA2
ath-u.5
for
GCH
gma-u.5
for
100791686
gma-u.5
for
100778763
gma-u.5
for
100782332
bra-r.6
for
103837523
bra-r.6
for
103837892
bra-r.6
for
103873853
vvi-u.5
for
100248717
vvi-u.5
for
100241208
ppo-u.5
for
7466784
ppo-u.5
for
18107058
ppo-u.5
for
18095218
mtr-u.5
for
11418835
mtr-u.5
for
11426139
ghi-r.1
for
107898789
ghi-r.1
for
107908940
ghi-r.1
for
121221463
bna-r.1
for
106368672
bna-r.1
for
106348065
bna-r.1
for
106357647
cit-r.1
for
102626341
cit-r.1
for
102621261
osa-u.5
for
9270160
osa-u.5
for
4329733
zma-u.5
for
100383821
zma-u.5
for
100304324
tae-r.2
for
123127569
tae-r.2
for
123137212
tae-r.2
for
123144654
hvu-r.1
for
123401666
hvu-r.1
for
123408293
sbi-r.1
for
8055385
sbi-r.1
for
8072615
bdi-r.1
for
100844595
bdi-r.1
for
100836975
bdi-r.1
for
100832262
cre-r.1
for
CHLRE_14g620350v5


Ortholog ID: 2701
Species sot sot sly sly nta nta nta ath ath gma gma gma bra bra bra vvi vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna cit cit osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi bdi cre
Symbol LOC102600595 LOC102585508 ribA LOC101263963 LOC107809151 LOC107789772 LOC107789601 RIBA2 GCH LOC100778763 LOC100801046 LOC100795684 LOC103837523 LOC103837892 LOC103873853 LOC100248717 LOC100241208 LOC7466784 LOC18095218 LOC11418835 LOC11426139 LOC107908940 LOC121221463 LOC107949144 LOC106348065 LOC106426651 LOC106366252 LOC102626341 LOC102621261 LOC9270160 LOC4329733 LOC100383821 LOC100304324 LOC123127569 LOC123148607 LOC123165711 LOC123401666 LOC123408293 LOC8055385 LOC8072615 LOC100844595 LOC100836975 LOC100832262 CHLRE_14g620350v5
Function* bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone-4-phosphate synthase bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like riboflavin biosynthesis protein GTP cyclohydrolase II bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic monofunctional riboflavin biosynthesis protein RIBA 2, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic Bifunctional riboflavin biosynthesis protein RIBA 1 chloroplastic Bifunctional riboflavin biosynthesis protein RIBA 1 chloroplastic probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
sot00630 Glyoxylate and dicarboxylate metabolism 2
sot01240 Biosynthesis of cofactors 2
sot04626 Plant-pathogen interaction 2
sot00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 3
sly03060 Protein export 2
sly00620 Pyruvate metabolism 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 3
nta00710 Carbon fixation by Calvin cycle 3
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
nta00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00740 Riboflavin metabolism 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
nta01240 Biosynthesis of cofactors 3
nta04130 SNARE interactions in vesicular transport 3
nta00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00740 Riboflavin metabolism 2
gma00790 Folate biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
gma04626 Plant-pathogen interaction 5
gma00740 Riboflavin metabolism 2
gma00790 Folate biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00740 Riboflavin metabolism 2
gma00790 Folate biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 4
bra00051 Fructose and mannose metabolism 3
bra00270 Cysteine and methionine metabolism 3
bra00480 Glutathione metabolism 3
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
vvi04626 Plant-pathogen interaction 3
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 5
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ppo01200 Carbon metabolism 2
ppo03010 Ribosome 2
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 5
ppo00520 Amino sugar and nucleotide sugar metabolism 3
ppo01250 Biosynthesis of nucleotide sugars 3
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00740 Riboflavin metabolism 5
mtr01240 Biosynthesis of cofactors 5
mtr00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00740 Riboflavin metabolism 4
mtr01240 Biosynthesis of cofactors 4
mtr00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 4
ghi00790 Folate biosynthesis 4
ghi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 4
ghi00790 Folate biosynthesis 4
ghi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 4
ghi00790 Folate biosynthesis 4
ghi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 6
bna00740 Riboflavin metabolism 4
bna00790 Folate biosynthesis 4
bna00250 Alanine, aspartate and glutamate metabolism 2
bna00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 6
bna00740 Riboflavin metabolism 4
bna00790 Folate biosynthesis 4
bna00250 Alanine, aspartate and glutamate metabolism 2
bna00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 6
bna00740 Riboflavin metabolism 4
bna00790 Folate biosynthesis 4
bna00250 Alanine, aspartate and glutamate metabolism 2
bna00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00350 Tyrosine metabolism 2
osa00360 Phenylalanine metabolism 2
osa00950 Isoquinoline alkaloid biosynthesis 2
osa04075 Plant hormone signal transduction 2
osa00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 5
osa04626 Plant-pathogen interaction 3
osa01240 Biosynthesis of cofactors 2
osa04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae01232 Nucleotide metabolism 3
tae04075 Plant hormone signal transduction 3
tae00740 Riboflavin metabolism 3
tae00790 Folate biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00480 Glutathione metabolism 3
tae00740 Riboflavin metabolism 3
tae00790 Folate biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00480 Glutathione metabolism 3
tae00740 Riboflavin metabolism 3
tae00790 Folate biosynthesis 3
tae01240 Biosynthesis of cofactors 3
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu02010 ABC transporters 2
hvu04075 Plant hormone signal transduction 2
hvu00220 Arginine biosynthesis 2
hvu01210 2-Oxocarboxylic acid metabolism 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 4
hvu00860 Porphyrin metabolism 2
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
sbi04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00790 Folate biosynthesis 3
bdi01240 Biosynthesis of cofactors 3
bdi00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 5
bdi00790 Folate biosynthesis 3
bdi01200 Carbon metabolism 3
bdi00740 Riboflavin metabolism 2
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 3
cre00740 Riboflavin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102600595 102585508 544238 101263963 107809151 107789772 107789601 816777 836551 100778763 100801046 100795684 103837523 103837892 103873853 100248717 100241208 7466784 18095218 11418835 11426139 107908940 121221463 107949144 106348065 106426651 106366252 102626341 102621261 9270160 4329733 100383821 100304324 123127569 123148607 123165711 123401666 123408293 8055385 8072615 100844595 100836975 100832262 5715886
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