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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102601870   cactin 
 sly-u.5   101252831   splicing factor Cactin 
 nta-r.1   107793315   splicing factor Cactin-like 
 nta-r.1   107800073   splicing factor Cactin 
 ath-u.5   AT1G03910   cactus-binding carboxy-terminal, cactin 
 gma-u.5   100805202   cactin 
 gma-u.5   100780087   cactin 
 gma-u.5   100775485   cactin 
 bra-r.6   103844302   cactin 
 bra-r.6   103843679   cactin 
 vvi-u.5   100245238   splicing factor Cactin 
 ppo-u.5   18100098   cactin 
 mtr-u.5   11429905   cactin 
 mtr-u.5   11425048   cactin 
 ghi-r.1   107948128   cactin 
 ghi-r.1   107899511   cactin 
 bna-r.1   106400495   cactin-like 
 bna-r.1   106370956   cactin-like 
 bna-r.1   106369262   cactin 
 cit-r.1   102614062   cactin 
 osa-u.5   9268667   splicing factor Cactin 
 zma-u.5   100382147   Cactin 
 tae-r.2   123113745   cactin 
 tae-r.2   123105455   cactin 
 tae-r.2   123123256   cactin 
 hvu-r.1   123452778   cactin 
 sbi-r.1   8061158   cactin 
 bdi-r.1   100830256   cactin 
 cre-r.1   CHLRE_09g398650v5   uncharacterized protein 

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Top 50 coexpressed genes to 102601870 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102601870 (sot-r.1 coexpression data)

CoexMap"102601870"


sotLOC102601870 | Entrez gene ID : 102601870      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 2 1 3 2 1 1 2 2 3 1 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045292 [list] [network] mRNA cis splicing, via spliceosome  (20 genes)  IEA  
GO CC
GO:0005681 [list] [network] spliceosomal complex  (119 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4349 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006338964.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 4  (predict for XP_006338964.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006338964.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102601870
sly-u.5
for
101252831
nta-r.1
for
107793315
nta-r.1
for
107800073
ath-u.5
for
AT1G03910
gma-u.5
for
100805202
gma-u.5
for
100780087
gma-u.5
for
100775485
bra-r.6
for
103844302
bra-r.6
for
103843679
vvi-u.5
for
100245238
ppo-u.5
for
18100098
mtr-u.5
for
11429905
mtr-u.5
for
11425048
ghi-r.1
for
107948128
ghi-r.1
for
107899511
bna-r.1
for
106400495
bna-r.1
for
106370956
bna-r.1
for
106369262
cit-r.1
for
102614062
osa-u.5
for
9268667
zma-u.5
for
100382147
tae-r.2
for
123113745
tae-r.2
for
123105455
tae-r.2
for
123123256
hvu-r.1
for
123452778
sbi-r.1
for
8061158
bdi-r.1
for
100830256
cre-r.1
for
CHLRE_09g398650v5


Ortholog ID: 8259
Species sot sly nta nta ath gma gma gma bra bra vvi ppo mtr mtr ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102601870 LOC101252831 LOC107793315 LOC107800073 AT1G03910 LOC100805202 LOC100780087 LOC100775485 LOC103844302 LOC103843679 LOC100245238 LOC18100098 LOC11429905 LOC11425048 LOC107948128 LOC107899511 LOC106400495 LOC106370956 LOC106369262 LOC102614062 LOC9268667 LOC100382147 LOC123113745 LOC123105455 LOC123123256 LOC123452778 LOC8061158 LOC100830256 CHLRE_09g398650v5
Function* cactin splicing factor Cactin splicing factor Cactin-like splicing factor Cactin cactus-binding carboxy-terminal, cactin cactin cactin cactin cactin cactin splicing factor Cactin cactin cactin cactin cactin cactin cactin-like cactin-like cactin cactin splicing factor Cactin Cactin cactin cactin cactin cactin cactin cactin uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03015 mRNA surveillance pathway 2
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03015 mRNA surveillance pathway 2
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 9
bna03015 mRNA surveillance pathway 2
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 4
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102601870 101252831 107793315 107800073 839371 100805202 100780087 100775485 103844302 103843679 100245238 18100098 11429905 11425048 107948128 107899511 106400495 106370956 106369262 102614062 9268667 100382147 123113745 123105455 123123256 123452778 8061158 100830256 5720857
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