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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1  102602468  uncharacterized LOC102602468 
 sly-u.5  101251654  uncharacterized LOC101251654 
 ath-u.5  AT3G23255  tRNA dimethylallyltransferase 
 gma-u.5  100500369  uncharacterized LOC100500369 
 bra-r.6  103828758  uncharacterized LOC103828758 
 ppo-u.5  7481184  uncharacterized LOC7481184 
 mtr-u.5  11437764  uncharacterized LOC11437764 
 ghi-r.1  107925358  uncharacterized LOC107925358 
 ghi-r.1  107921408  uncharacterized LOC107921408 
 cit-r.1  102617230  uncharacterized LOC102617230 
 zma-u.5  100273819  uncharacterized LOC100273819 
 bdi-r.1  100842867  uncharacterized LOC100842867 
 cre-r.1  CHLRE_03g180500v5  uncharacterized protein 

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Top 50 coexpressed genes to 102602468 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102602468 (sot-r.1 coexpression data)

CoexMap"102602468"


sotLOC102602468 | Entrez gene ID : 102602468
Species sot sly ath gma bra ppo mtr ghi cit zma bdi cre vvi nta osa tae bna sbi hvu
Paralog 1 1 1 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (64 genes)  IEA  
GO CC
GO:0097196 [list] [network] Shu complex  (2 genes)  IEA  
GO MF
GO:0003697 [list] [network] single-stranded DNA binding  (58 genes)  IEA  
Protein XP_006344911.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 3,  cysk_nucl 3  (predict for XP_006344911.1)
Subcellular
localization
TargetP
other 7  (predict for XP_006344911.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sot-r.1
for
102602468


sly-u.5
for
101251654


ath-u.5
for
AT3G23255


gma-u.5
for
100500369


bra-r.6
for
103828758


ppo-u.5
for
7481184


mtr-u.5
for
11437764


ghi-r.1
for
107925358


ghi-r.1
for
107921408


cit-r.1
for
102617230


zma-u.5
for
100273819


bdi-r.1
for
100842867


cre-r.1
for
CHLRE_03g180500v5



Ortholog ID: 11154
Species sot sly ath gma bra ppo mtr ghi ghi cit zma bdi cre
Symbol LOC102602468 LOC101251654 AT3G23255 LOC100500369 LOC103828758 LOC7481184 LOC11437764 LOC107925358 LOC107921408 LOC102617230 LOC100273819 LOC100842867 CHLRE_03g180500v5
Function* uncharacterized LOC102602468 uncharacterized LOC101251654 tRNA dimethylallyltransferase uncharacterized LOC100500369 uncharacterized LOC103828758 uncharacterized LOC7481184 uncharacterized LOC11437764 uncharacterized LOC107925358 uncharacterized LOC107921408 uncharacterized LOC102617230 uncharacterized LOC100273819 uncharacterized LOC100842867 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102602468 101251654 5008023 100500369 103828758 7481184 11437764 107925358 107921408 102617230 100273819 100842867 5728784
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