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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g180500v5   uncharacterized protein 
 ath-u.5   AT3G23255   tRNA dimethylallyltransferase 
 gma-u.5   100500369   uncharacterized LOC100500369 
 sly-u.5   101251654   uncharacterized LOC101251654 
 zma-u.5   100273819   uncharacterized LOC100273819 
 ppo-u.5   7481184   uncharacterized LOC7481184 
 mtr-u.5   11437764   uncharacterized LOC11437764 

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Top 50 coexpressed genes to CHLRE_03g180500v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g180500v5 (cre-r.1 coexpression data)

CoexMap"5728784"


creCHLRE_03g180500v5 | Entrez gene ID : 5728784      
Species cre ath gma sly zma ppo mtr sbi nta bra osa vvi cit hvu bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (82 genes)  IEA  
GO CC
GO:0097196 [list] [network] Shu complex  (2 genes)  IEA  
GO MF
GO:0003697 [list] [network] single-stranded DNA binding  (46 genes)  IEA  
Protein XP_042926166.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  extr 2,  chlo 1,  pero 1  (predict for XP_042926166.1)
Subcellular
localization
TargetP
scret 5  (predict for XP_042926166.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g180500v5

.
ath-u.5
for
AT3G23255

.
gma-u.5
for
100500369

.
sly-u.5
for
101251654

.
zma-u.5
for
100273819

.
ppo-u.5
for
7481184

.
mtr-u.5
for
11437764

.


Ortholog ID: 11154
Species ath gma sly zma bra ppo mtr ghi ghi cre sot cit bdi
Symbol AT3G23255 LOC100500369 LOC101251654 LOC100273819 LOC103828758 LOC7481184 LOC11437764 LOC107921408 LOC107925358 CHLRE_03g180500v5 LOC102602468 LOC102617230 LOC100842867
Function* tRNA dimethylallyltransferase uncharacterized LOC100500369 uncharacterized LOC101251654 uncharacterized LOC100273819 uncharacterized LOC103828758 uncharacterized LOC7481184 uncharacterized LOC11437764 uncharacterized LOC107921408 uncharacterized LOC107925358 uncharacterized protein uncharacterized LOC102602468 uncharacterized LOC102617230 uncharacterized LOC100842867
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5008023 100500369 101251654 100273819 103828758 7481184 11437764 107921408 107925358 5728784 102602468 102617230 100842867
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