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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102603011   heterogeneous nuclear ribonucleoprotein A2 homolog 1-like 
 sly-u.5   101255522   UBP1-associated protein 2A 
 nta-r.1   107830830   UBP1-associated protein 2B-like 
 nta-r.1   107796082   UBP1-associated protein 2B 
 ath-u.5   AT2G41060   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   UBA2A   UBP1-associated protein 2A 
 gma-u.5   100783742   UBP1-associated protein 2B 
 gma-u.5   100784200   UBP1-associated protein 2A 
 gma-u.5   100792637   UBP1-associated protein 2B 
 bra-r.6   103841585   UBP1-associated protein 2A 
 bra-r.6   103865862   UBP1-associated protein 2B 
 vvi-u.5   GO:0003676   hypothetical protein 
 vvi-u.5   100243393   UBP1-associated protein 2A 
 ppo-u.5   7453742   UBP1-associated protein 2A 
 ppo-u.5   7479624   UBP1-associated protein 2B 
 mtr-u.5   11435209   UBP1-associated protein 2A 
 mtr-u.5   11436987   UBP1-associated protein 2A 
 ghi-r.1   107906206   UBP1-associated protein 2B 
 ghi-r.1   107959043   UBP1-associated protein 2B 
 ghi-r.1   107962790   UBP1-associated protein 2B 
 bna-r.1   125574918   UBP1-associated protein 2A-like 
 bna-r.1   106431111   UBP1-associated protein 2B 
 bna-r.1   106391637   UBP1-associated protein 2B 
 cit-r.1   102607748   UBP1-associated protein 2A 
 osa-u.5   4326212   UBP1-associated protein 2A 
 zma-u.5   100283567   uncharacterized LOC100283567 
 tae-r.2   123078113   RNA-binding protein P 
 tae-r.2   123069633   RNA-binding protein P 
 tae-r.2   123061043   RNA-binding protein P 
 hvu-r.1   123443465   RNA-binding protein P-like 
 sbi-r.1   8074505   UBP1-associated protein 2A 
 bdi-r.1   100823047   UBP1-associated protein 2B 

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Top 50 coexpressed genes to 102603011 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102603011 (sot-r.1 coexpression data)

CoexMap"102603011"


sotLOC102603011 | Entrez gene ID : 102603011      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 2 2 3 2 2 2 2 3 3 1 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot03040 [list] [network] Spliceosome (223 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2556 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
Protein NP_001274776.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  mito 1,  extr 1,  chlo_mito 1  (predict for NP_001274776.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001274776.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102603011
sly-u.5
for
101255522
nta-r.1
for
107830830
nta-r.1
for
107796082
ath-u.5
for
AT2G41060
ath-u.5
for
UBA2A
gma-u.5
for
100783742
gma-u.5
for
100784200
gma-u.5
for
100792637
bra-r.6
for
103841585
bra-r.6
for
103865862
vvi-u.5
for
GO:0003676
vvi-u.5
for
100243393
ppo-u.5
for
7453742
ppo-u.5
for
7479624
mtr-u.5
for
11435209
mtr-u.5
for
11436987
ghi-r.1
for
107906206
ghi-r.1
for
107959043
ghi-r.1
for
107962790
bna-r.1
for
125574918
bna-r.1
for
106431111
bna-r.1
for
106391637
cit-r.1
for
102607748
osa-u.5
for
4326212
zma-u.5
for
100283567
tae-r.2
for
123078113
tae-r.2
for
123069633
tae-r.2
for
123061043
hvu-r.1
for
123443465
sbi-r.1
for
8074505
bdi-r.1
for
100823047


Ortholog ID: 5485
Species sot sly nta nta ath ath gma gma gma bra bra vvi vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC102603011 LOC101255522 LOC107830830 LOC107796082 AT2G41060 UBA2A LOC100784200 LOC100792637 LOC100819802 LOC103841585 LOC103865862 GO:0003676 LOC100243393 LOC7453742 LOC7479624 LOC11435209 LOC11436987 LOC107906206 LOC107959043 LOC107962790 LOC125574918 LOC106391637 LOC106368049 LOC102607748 LOC4326212 LOC100283567 LOC123078113 LOC123069633 LOC123061043 LOC123443465 LOC8074505 LOC100823047
Function* heterogeneous nuclear ribonucleoprotein A2 homolog 1-like UBP1-associated protein 2A UBP1-associated protein 2B-like UBP1-associated protein 2B RNA-binding (RRM/RBD/RNP motifs) family protein UBP1-associated protein 2A UBP1-associated protein 2A UBP1-associated protein 2B UBP1-associated protein 2A UBP1-associated protein 2A UBP1-associated protein 2B hypothetical protein UBP1-associated protein 2A UBP1-associated protein 2A UBP1-associated protein 2B UBP1-associated protein 2A UBP1-associated protein 2A UBP1-associated protein 2B UBP1-associated protein 2B UBP1-associated protein 2B UBP1-associated protein 2A-like UBP1-associated protein 2B UBP1-associated protein 2A UBP1-associated protein 2A UBP1-associated protein 2A uncharacterized LOC100283567 RNA-binding protein P RNA-binding protein P RNA-binding protein P RNA-binding protein P-like UBP1-associated protein 2A UBP1-associated protein 2B
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 12
nta03013 Nucleocytoplasmic transport 3
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 11
nta03013 Nucleocytoplasmic transport 3
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03250 Viral life cycle - HIV-1 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma03040 Spliceosome 4
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 7
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
vvi03010 Ribosome 4
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 11
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 9
mtr03015 mRNA surveillance pathway 4
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
osa00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 12
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae04144 Endocytosis 3
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu03040 Spliceosome 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102603011 101255522 107830830 107796082 818705 824853 100784200 100792637 100819802 103841585 103865862 100258161 100243393 7453742 7479624 11435209 11436987 107906206 107959043 107962790 125574918 106391637 106368049 102607748 4326212 100283567 123078113 123069633 123061043 123443465 8074505 100823047
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