Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8074505   UBP1-associated protein 2A 
 zma-u.5   100283567   uncharacterized LOC100283567 
 osa-u.5   4326212   UBP1-associated protein 2A 
 ath-u.5   AT2G41060   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   UBA2A   UBP1-associated protein 2A 
 gma-u.5   100784200   UBP1-associated protein 2A 
 gma-u.5   100792637   UBP1-associated protein 2B 
 gma-u.5   100819802   UBP1-associated protein 2A 
 sly-u.5   101255522   UBP1-associated protein 2A 
 vvi-u.5   GO:0003676   hypothetical protein 
 vvi-u.5   100243393   UBP1-associated protein 2A 
 ppo-u.5   7453742   UBP1-associated protein 2A 
 ppo-u.5   7479624   UBP1-associated protein 2B 
 mtr-u.5   11435209   UBP1-associated protein 2A 
 mtr-u.5   11436987   UBP1-associated protein 2A 

close


Top 50 coexpressed genes to 8074505 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 8074505 (sbi-r.1 coexpression data)

CoexMap"8074505"


sbiLOC8074505 | Entrez gene ID : 8074505      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 2 3 1 2 2 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03040 [list] [network] Spliceosome (208 genes)
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_002457616.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  mito 3,  cyto_nucl 3  (predict for XP_002457616.1)
Subcellular
localization
TargetP
chlo 4,  mito 3  (predict for XP_002457616.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8074505

.
zma-u.5
for
100283567

.
osa-u.5
for
4326212

.
ath-u.5
for
AT2G41060

.
ath-u.5
for
UBA2A

.
gma-u.5
for
100784200

.
gma-u.5
for
100792637

.
gma-u.5
for
100819802

.
sly-u.5
for
101255522

.
vvi-u.5
for
GO:0003676

.
vvi-u.5
for
100243393

.
ppo-u.5
for
7453742

.
ppo-u.5
for
7479624

.
mtr-u.5
for
11435209

.
mtr-u.5
for
11436987

.


Ortholog ID: 5485
Species ath ath gma gma sly osa zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT2G41060 UBA2A LOC100792637 LOC100784200 LOC101255522 LOC4326212 LOC100283567 LOC103865862 LOC103841585 GO:0003676 LOC100243393 LOC7453742 LOC7479624 LOC11436987 LOC11435209 LOC123061043 LOC123069633 LOC123443465 LOC107959043 LOC107906206 LOC125574918 LOC106368049 LOC8074505 LOC102603011 LOC102607748 LOC100823047 LOC107830830 LOC107796082
Function* RNA-binding (RRM/RBD/RNP motifs) family protein UBP1-associated protein 2A UBP1-associated protein 2B UBP1-associated protein 2A UBP1-associated protein 2A UBP1-associated protein 2A uncharacterized LOC100283567 UBP1-associated protein 2B UBP1-associated protein 2A hypothetical protein UBP1-associated protein 2A UBP1-associated protein 2A UBP1-associated protein 2B UBP1-associated protein 2A UBP1-associated protein 2A RNA-binding protein P RNA-binding protein P RNA-binding protein P-like UBP1-associated protein 2B UBP1-associated protein 2B UBP1-associated protein 2A-like UBP1-associated protein 2A UBP1-associated protein 2A heterogeneous nuclear ribonucleoprotein A2 homolog 1-like UBP1-associated protein 2A UBP1-associated protein 2B UBP1-associated protein 2B-like UBP1-associated protein 2B
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03250 Viral life cycle - HIV-1 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
osa00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 7
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
vvi03010 Ribosome 4
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 9
mtr03015 mRNA surveillance pathway 4
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 11
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae04144 Endocytosis 3
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu03040 Spliceosome 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 12
nta03013 Nucleocytoplasmic transport 3
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 11
nta03013 Nucleocytoplasmic transport 3
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818705 824853 100792637 100784200 101255522 4326212 100283567 103865862 103841585 100258161 100243393 7453742 7479624 11436987 11435209 123061043 123069633 123443465 107959043 107906206 125574918 106368049 8074505 102603011 102607748 100823047 107830830 107796082
The preparation time of this page was 0.1 [sec].