ATTED-II : GeneCoexpression result

Species	Gene	Description
sot-r.1	102606043	60S ribosomal protein L10a-1
sly-u.5	101252594	large ribosomal subunit protein uL1z
sly-u.5	101258620	large ribosomal subunit protein uL1z
sly-u.5	101245686	large ribosomal subunit protein uL1z
ath-u.5	PGY1	Ribosomal protein L1p/L10e family
ath-u.5	AT5G22440	Ribosomal protein L1p/L10e family
ath-u.5	AT1G08360	Ribosomal protein L1p/L10e family
gma-u.5	100527698	60S ribosomal protein L10a
gma-u.5	100305550	uncharacterized LOC100305550
gma-u.5	100499715	uncharacterized LOC100499715
vvi-u.5	100266487	large ribosomal subunit protein uL1z
vvi-u.5	100263858	large ribosomal subunit protein uL1
ppo-u.5	7473116	60S ribosomal protein L10a-2
ppo-u.5	7473122	60S ribosomal protein L10a-2
ppo-u.5	18098119	60S ribosomal protein L10a-2
mtr-u.5	11412225	60S ribosomal protein L10a-1
mtr-u.5	11428420	60S ribosomal protein L10a-1
mtr-u.5	11406763	60S ribosomal protein L10a-1
osa-u.5	4325065	large ribosomal subunit protein uL1-like
osa-u.5	4329171	large ribosomal subunit protein uL1-like
osa-u.5	9268245	large ribosomal subunit protein uL1-like
zma-u.5	100192963	ribosomal protein
zma-u.5	100272335	60S ribosomal protein L10a-1
zma-u.5	100502186	ribosomal protein

Annotation

functional annotation

KEGG

sot03010 [list] [network] Ribosome (406 genes)

GO BP

GO:0006412 [list] [network] translation

(522 genes)

IEA

GO CC

GO:0015934 [list] [network] large ribosomal subunit

(138 genes)

IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome	(377 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1335 genes)	IEA

Protein

XP_006362897.1 [sequence] [blastp]
XP_006362898.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 3, chlo 2, plas 1, chlo_mito 1, golg_plas 1	(predict for XP_006362897.1)
nucl 4, cyto 3, chlo 2, plas 1, chlo_mito 1, golg_plas 1	(predict for XP_006362898.1)

Subcellular
localization
TargetP

other 7, chlo 4	(predict for XP_006362897.1)
other 7, chlo 4	(predict for XP_006362898.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102606043	sly-u.5 for 101252594	sly-u.5 for 101258620	sly-u.5 for 101245686	ath-u.5 for PGY1	ath-u.5 for AT5G22440	ath-u.5 for AT1G08360	gma-u.5 for 100527698	gma-u.5 for 100305550	gma-u.5 for 100499715	vvi-u.5 for 100266487	vvi-u.5 for 100263858	ppo-u.5 for 7473116	ppo-u.5 for 7473122	ppo-u.5 for 18098119	mtr-u.5 for 11412225	mtr-u.5 for 11428420	mtr-u.5 for 11406763	osa-u.5 for 4325065	osa-u.5 for 4329171	osa-u.5 for 9268245	zma-u.5 for 100192963	zma-u.5 for 100272335	zma-u.5 for 100502186

Ortholog

Ortholog ID: 1415

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

PGY1

Function^*

60S ribosomal protein L10a-1-like

60S ribosomal protein L10a-1

large ribosomal subunit protein uL1z

Ribosomal protein L1p/L10e family

uncharacterized LOC100499715

60S ribosomal protein L10a

60S ribosomal protein L10a-1

60S ribosomal protein L10a-3

large ribosomal subunit protein uL1

large ribosomal subunit protein uL1z

60S ribosomal protein L10a-2

60S ribosomal protein L10a-1

60S ribosomal protein L10a

60S ribosomal protein L10a-2

60S ribosomal protein L10a-3-like

60S ribosomal protein L10a-3

60S ribosomal protein L10a

large ribosomal subunit protein uL1-like

ribosomal protein

60S ribosomal protein L10a

60S ribosomal protein L10a-1

60S ribosomal protein L10a

60S ribosomal protein L10a-1

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	13
nta03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	16
gma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	17
ppo00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	12
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	17
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	18
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	16
hvu00240	Pyrimidine metabolism	2
hvu01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	18

Expression

Expression pattern

Entrez Gene ID^*

102587145

102599549

101258620

101252594

107765506

107771734

832305

817299

100499715

100527698

103871582

103856517

100263858

100266487

18098119

18098120

11412225

11428420

107889172

107959356

106424329

106384670

102609236

9266191

9268245

100502186

100192963

123155974

123071494

123446858

123444833

8057983

100824924

100840807

5725358

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102606043 (sot-r.1 coexpression data)

Top 50 enrichment test to 102606043 (sot-r.1 coexpression data)


Species	sot	sly	ath	gma	vvi	ppo	mtr	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre
Paralog	1	3	3	3	2	3	3	3	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102606043 (sot-r.1 coexpression data)

Top 50 enrichment test to 102606043 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**