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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102608664   uncharacterized LOC102608664 
 ath-u.5   AT1G17680   tetratricopeptide repeat (TPR)-containing protein 
 gma-u.5   100813793   general transcription factor 3C polypeptide 3 
 gma-u.5   100804533   general transcription factor 3C polypeptide 3 
 vvi-u.5   100257006   uncharacterized LOC100257006 
 mtr-u.5   11444918   general transcription factor 3C polypeptide 3 
 mtr-u.5   11420262   general transcription factor 3C polypeptide 3 
 sly-u.5   101258763   uncharacterized LOC101258763 
 osa-u.5   4350254   uncharacterized LOC4350254 
 zma-u.5   103652996   general transcription factor 3C polypeptide 3 

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Top 50 coexpressed genes to 102608664 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102608664 (cit-r.1 coexpression data)

CoexMap"102608664"


citLOC102608664 | Entrez gene ID : 102608664    
Species cit ath gma vvi mtr sly osa zma bdi hvu bra bna ppo sbi ghi sot nta cre tae
Paralog 1 1 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006383 [list] [network] transcription by RNA polymerase III  (23 genes)  IEA  
GO CC
GO:0000127 [list] [network] transcription factor TFIIIC complex  (7 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006466039.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 3,  cyto_plas 3  (predict for XP_006466039.2)
Subcellular
localization
TargetP
other 9  (predict for XP_006466039.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102608664
ath-u.5
for
AT1G17680
gma-u.5
for
100813793
gma-u.5
for
100804533
vvi-u.5
for
100257006
mtr-u.5
for
11444918
mtr-u.5
for
11420262
sly-u.5
for
101258763
osa-u.5
for
4350254
zma-u.5
for
103652996


Ortholog ID: 7038
Species cit cit ath bra ghi ghi bna gma gma vvi mtr mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre cre
Symbol LOC102608664 LOC102627555 AT1G17680 LOC103872551 LOC107931920 LOC107947032 LOC106427155 LOC100804533 LOC100813793 LOC100257006 LOC11420262 LOC11444918 LOC101258763 LOC102594364 LOC107760391 LOC107827214 LOC4350254 LOC103652996 LOC123113279 LOC123122792 LOC123452182 LOC8085150 LOC100831287 CHLRE_10g464950v5 CHLRE_06g268800v5
Function* uncharacterized LOC102608664 uncharacterized LOC102627555 tetratricopeptide repeat (TPR)-containing protein general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 uncharacterized LOC100257006 general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 uncharacterized LOC101258763 general transcription factor 3C polypeptide 3 uncharacterized LOC107760391 uncharacterized LOC107827214 uncharacterized LOC4350254 general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00052 Galactose metabolism 2
ghi00511 Other glycan degradation 2
ghi00531 Glycosaminoglycan degradation 2
ghi00600 Sphingolipid metabolism 2
ghi00604 Glycosphingolipid biosynthesis - ganglio series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00052 Galactose metabolism 2
ghi00511 Other glycan degradation 2
ghi00531 Glycosaminoglycan degradation 2
ghi00600 Sphingolipid metabolism 2
ghi00604 Glycosphingolipid biosynthesis - ganglio series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 3
bna03040 Spliceosome 2
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03460 Fanconi anemia pathway 2
gma04142 Lysosome 2
gma04144 Endocytosis 2
gma05100 Bacterial invasion of epithelial cells 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 4
gma04144 Endocytosis 4
gma05100 Bacterial invasion of epithelial cells 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 3
bdi03013 Nucleocytoplasmic transport 2
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102608664 102627555 838344 103872551 107931920 107947032 106427155 100804533 100813793 100257006 11420262 11444918 101258763 102594364 107760391 107827214 4350254 103652996 123113279 123122792 123452182 8085150 100831287 66055179 5721885
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