ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cit-r.1	102610407	hypothetical protein
ath-u.5	AT2G41800	imidazolonepropionase (Protein of unknown function, DUF642)
ath-u.5	AT2G41810	imidazolonepropionase (Protein of unknown function, DUF642)
ath-u.5	AT3G08030	DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
bra-r.6	103866589	uncharacterized LOC103866589
ghi-r.1	107945376	uncharacterized LOC107945376
ghi-r.1	107889403	uncharacterized LOC107889403
ghi-r.1	107891310	uncharacterized LOC107891310
bna-r.1	125585424	uncharacterized LOC125585424
bna-r.1	125585560	uncharacterized LOC125585560
bna-r.1	125588630	uncharacterized LOC125588630
gma-u.5	100796094	uncharacterized LOC100796094
gma-u.5	100804119	uncharacterized LOC100804119
gma-u.5	100812299	uncharacterized LOC100812299
vvi-u.5	100258445	protein DUF642 L-GALACTONO-1,4-LACTONE-RESPONSIVE GENE 2
vvi-u.5	100257236	protein DUF642 L-GALACTONO-1,4-LACTONE-RESPONSIVE GENE 2
ppo-u.5	7496132	protein DUF642 L-GALACTONO-1,4-LACTONE-RESPONSIVE GENE 2
ppo-u.5	7480067	protein DUF642 L-GALACTONO-1,4-LACTONE-RESPONSIVE GENE 2
mtr-u.5	25479953	uncharacterized LOC25479953
mtr-u.5	11441906	uncharacterized LOC11441906
mtr-u.5	11446162	uncharacterized LOC11446162
sly-u.5	101245049	protein TEEBE
sly-u.5	101245348	protein TEEBE-like
sly-u.5	101251618	protein TEEBE
sot-r.1	102579436	uncharacterized LOC102579436
sot-r.1	102578783	uncharacterized LOC102578783
sot-r.1	102579762	uncharacterized LOC102579762
nta-r.1	107824802	protein TEEBE-like
nta-r.1	107803988	protein TEEBE
nta-r.1	107762645	protein TEEBE
osa-u.5	4334511	protein TEEBE
zma-u.5	100277106	uncharacterized LOC100277106
tae-r.2	123105547	uncharacterized LOC123105547
tae-r.2	123123360	uncharacterized LOC123123360
tae-r.2	123113854	uncharacterized LOC123113854
hvu-r.1	123452880	uncharacterized LOC123452880
sbi-r.1	8081206	uncharacterized LOC8081206
bdi-r.1	100845370	uncharacterized LOC100845370

Top 50 coexpressed genes to 102610407 (cit-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102610407 (cit-r.1 coexpression data)

CoexMap"102610407"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005618 [list] [network] cell wall	(152 genes)	IEA
GO:0005886 [list] [network] plasma membrane	(846 genes)	IEA

GO MF

Protein

XP_006482850.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 5, vacu 1, E.R. 1, E.R._vacu 1

(predict for XP_006482850.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_006482850.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cit-r.1 for 102610407	ath-u.5 for AT2G41800	ath-u.5 for AT2G41810	ath-u.5 for AT3G08030	bra-r.6 for 103866589	ghi-r.1 for 107945376	ghi-r.1 for 107889403	ghi-r.1 for 107891310	bna-r.1 for 125585424	bna-r.1 for 125585560	bna-r.1 for 125588630	gma-u.5 for 100796094	gma-u.5 for 100804119	gma-u.5 for 100812299	vvi-u.5 for 100258445	vvi-u.5 for 100257236	ppo-u.5 for 7496132	ppo-u.5 for 7480067	mtr-u.5 for 25479953	mtr-u.5 for 11441906	mtr-u.5 for 11446162	sly-u.5 for 101245049	sly-u.5 for 101245348	sly-u.5 for 101251618	sot-r.1 for 102579436	sot-r.1 for 102578783	sot-r.1 for 102579762	nta-r.1 for 107824802	nta-r.1 for 107803988	nta-r.1 for 107762645	osa-u.5 for 4334511	zma-u.5 for 100277106	tae-r.2 for 123105547	tae-r.2 for 123123360	tae-r.2 for 123113854	hvu-r.1 for 123452880	sbi-r.1 for 8081206	bdi-r.1 for 100845370

Ortholog

Ortholog ID: 2213

Species

cit

ath

bra

ghi

bna

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

hypothetical protein

imidazolonepropionase (Protein of unknown function, DUF642)

DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)

uncharacterized LOC103848900

uncharacterized LOC103870618

uncharacterized LOC107900759

uncharacterized LOC107934018

uncharacterized LOC121219852

uncharacterized LOC125585424

uncharacterized LOC106453329

uncharacterized LOC106452857

uncharacterized LOC100796094

uncharacterized LOC100804119

uncharacterized LOC100812299

protein DUF642 L-GALACTONO-1,4-LACTONE-RESPONSIVE GENE 2

uncharacterized LOC25479953

uncharacterized LOC11446162

uncharacterized LOC11446164

protein TEEBE

protein TEEBE-like

protein TEEBE

uncharacterized LOC102578783

uncharacterized LOC102579762

uncharacterized LOC102603851

protein TEEBE-like

protein TEEBE

uncharacterized LOC100277106

uncharacterized LOC123105547

uncharacterized LOC123123360

uncharacterized LOC123113854

uncharacterized LOC123452880

uncharacterized LOC8081206

uncharacterized LOC100845370

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00040	Pentose and glucuronate interconversions	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00051	Fructose and mannose metabolism	2
ghi00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00051	Fructose and mannose metabolism	2
ghi00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00040	Pentose and glucuronate interconversions	4
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00040	Pentose and glucuronate interconversions	4
gma00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00520	Amino sugar and nucleotide sugar metabolism	2
gma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00040	Pentose and glucuronate interconversions	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	3
sly00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2
nta00514	Other types of O-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00062	Fatty acid elongation	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03030	DNA replication	4
sbi04145	Phagosome	4
sbi04517	IgSF CAM signaling	4
sbi04814	Motor proteins	4
sbi03430	Mismatch repair	3

Expression

Expression pattern

Entrez Gene ID^*

102610407

818779

818780

819994

103848900

103870618

107900759

107934018

121219852

125585424

106453329

106452857

100796094

100804119

100812299

100258445

100257236

7480067

7482294

7484016

25479953

11446162

11446164

101245049

101245348

101251618

102578783

102579762

102603851

107824802

107803988

107762645

4334511

100277106

123105547

123123360

123113854

123452880

8081206

100845370

The preparation time of this page was 0.1 [sec].


Species	cit	ath	bra	ghi	bna	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	1	3	1	3	3	3	2	2	3	3	3	3	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102610407 (cit-r.1 coexpression data)

Top 50 enrichment test to 102610407 (cit-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**