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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102611636   ATP synthase delta chain, chloroplastic-like 
 cit-r.1   127901335   ATP synthase delta chain, chloroplastic-like 
 ath-u.5   AT4G00895   ATPase, F1 complex, OSCP/delta subunit protein 
 bra-r.6   103853334   uncharacterized LOC103853334 
 ghi-r.1   107948155   ATP synthase delta chain, chloroplastic 
 ghi-r.1   107942891   ATP synthase subunit delta, chloroplastic 
 bna-r.1   125586348   uncharacterized LOC125586348 
 bna-r.1   106422247   uncharacterized LOC106422247 
 gma-u.5   100526851   ATP synthase delta chain-like protein 
 ppo-u.5   7486791   ATP synthase subunit delta, chloroplastic 
 mtr-u.5   11426714   ATP synthase delta chain, chloroplastic 
 sly-u.5   101249084   ATP synthase delta chain, chloroplastic 
 sot-r.1   102598933   ATP synthase subunit delta, chloroplastic 
 nta-r.1   107812168   uncharacterized LOC107812168 
 nta-r.1   107764404   ATP synthase subunit delta, chloroplastic-like 

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Top 50 coexpressed genes to 102611636 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102611636 (cit-r.1 coexpression data)

CoexMap"102611636"


citLOC102611636 | Entrez gene ID : 102611636    
Species cit ath bra ghi bna gma ppo mtr sly sot nta vvi bdi osa tae zma cre sbi hvu
Paralog 2 1 1 2 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit00190 [list] [network] Oxidative phosphorylation (139 genes)
cit00195 [list] [network] Photosynthesis (73 genes)
GO BP
GO:0009772 [list] [network] photosynthetic electron transport in photosystem II  (4 genes)  IEA  
GO:0009773 [list] [network] photosynthetic electron transport in photosystem I  (9 genes)  IEA  
GO:0015986 [list] [network] proton motive force-driven ATP synthesis  (18 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (72 genes)  IEA  
GO MF
GO:0046933 [list] [network] proton-transporting ATP synthase activity, rotational mechanism  (11 genes)  IEA  
Protein XP_006491331.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  mito 1  (predict for XP_006491331.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_006491331.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102611636
cit-r.1
for
127901335
ath-u.5
for
AT4G00895
bra-r.6
for
103853334
ghi-r.1
for
107948155
ghi-r.1
for
107942891
bna-r.1
for
125586348
bna-r.1
for
106422247
gma-u.5
for
100526851
ppo-u.5
for
7486791
mtr-u.5
for
11426714
sly-u.5
for
101249084
sot-r.1
for
102598933
nta-r.1
for
107812168
nta-r.1
for
107764404


Ortholog ID: 13446
Species cit cit ath bra ghi ghi bna bna gma ppo mtr sly sot nta nta
Symbol LOC102611636 LOC127901335 AT4G00895 LOC103853334 LOC107948155 LOC107942891 LOC125586348 LOC106422247 LOC100526851 LOC7486791 LOC11426714 LOC101249084 LOC102598933 LOC107812168 LOC107764404
Function* ATP synthase delta chain, chloroplastic-like ATP synthase delta chain, chloroplastic-like ATPase, F1 complex, OSCP/delta subunit protein uncharacterized LOC103853334 ATP synthase delta chain, chloroplastic ATP synthase subunit delta, chloroplastic uncharacterized LOC125586348 uncharacterized LOC106422247 ATP synthase delta chain-like protein ATP synthase subunit delta, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase subunit delta, chloroplastic uncharacterized LOC107812168 ATP synthase subunit delta, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit00195 Photosynthesis 3
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit00195 Photosynthesis 3
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 3
ghi00260 Glycine, serine and threonine metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi01200 Carbon metabolism 3
ghi01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 3
ghi00260 Glycine, serine and threonine metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi01200 Carbon metabolism 3
ghi01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna00670 One carbon pool by folate 4
bna00785 Lipoic acid metabolism 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 6
bna00630 Glyoxylate and dicarboxylate metabolism 6
bna00670 One carbon pool by folate 6
bna00785 Lipoic acid metabolism 6
bna01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma01240 Biosynthesis of cofactors 3
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 5
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 3
sot00190 Oxidative phosphorylation 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 3
nta00190 Oxidative phosphorylation 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
nta00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102611636 127901335 827987 103853334 107948155 107942891 125586348 106422247 100526851 7486791 11426714 101249084 102598933 107812168 107764404
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