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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7486791   ATP synthase subunit delta, chloroplastic 
 ppo-r.4   7486791   ATP synthase subunit delta, chloroplastic 
 ppo-m.4   7486791   ATP synthase subunit delta, chloroplastic 
 gma-u.5   100526851   ATP synthase delta chain-like protein 
 mtr-u.5   11426714   ATP synthase delta chain, chloroplastic 
 ath-u.5   AT4G00895   ATPase, F1 complex, OSCP/delta subunit protein 
 sly-u.5   101249084   ATP synthase delta chain, chloroplastic 

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Top 50 coexpressed genes to 7486791 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7486791 (ppo-u.5 coexpression data)

CoexMap"7486791"


ppoLOC7486791 | Entrez gene ID : 7486791    
Species ppo gma mtr ath sly sbi nta bra osa cre cit vvi hvu bdi sot zma tae bna ghi
Paralog 3 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00190 [list] [network] Oxidative phosphorylation (178 genes)
pop00195 [list] [network] Photosynthesis (104 genes)
GO BP
GO:0009772 [list] [network] photosynthetic electron transport in photosystem II  (10 genes)  IEA  
GO:0009773 [list] [network] photosynthetic electron transport in photosystem I  (12 genes)  IEA  
GO:0015986 [list] [network] proton motive force-driven ATP synthesis  (31 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (105 genes)  IEA  
GO MF
GO:0046933 [list] [network] proton-transporting ATP synthase activity, rotational mechanism  (17 genes)  IEA  
Protein XP_002320885.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  chlo_mito 3,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for XP_002320885.4)
Subcellular
localization
TargetP
other 6  (predict for XP_002320885.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7486791

.
ppo-r.4
for
7486791

.
ppo-m.4
for
7486791

.
gma-u.5
for
100526851

.
mtr-u.5
for
11426714

.
ath-u.5
for
AT4G00895

.
sly-u.5
for
101249084

.


Ortholog ID: 13446
Species ath gma sly bra ppo mtr ghi ghi bna bna sot cit cit nta nta
Symbol AT4G00895 LOC100526851 LOC101249084 LOC103853334 LOC7486791 LOC11426714 LOC107948155 LOC107942891 LOC125586348 LOC106422247 LOC102598933 LOC127901335 LOC102611636 LOC107812168 LOC107764404
Function* ATPase, F1 complex, OSCP/delta subunit protein ATP synthase delta chain-like protein ATP synthase delta chain, chloroplastic uncharacterized LOC103853334 ATP synthase subunit delta, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase subunit delta, chloroplastic uncharacterized LOC125586348 uncharacterized LOC106422247 ATP synthase subunit delta, chloroplastic ATP synthase delta chain, chloroplastic-like ATP synthase delta chain, chloroplastic-like uncharacterized LOC107812168 ATP synthase subunit delta, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma01240 Biosynthesis of cofactors 3
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 5
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 3
ghi00260 Glycine, serine and threonine metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi01200 Carbon metabolism 3
ghi01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 3
ghi00260 Glycine, serine and threonine metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi01200 Carbon metabolism 3
ghi01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna00670 One carbon pool by folate 4
bna00785 Lipoic acid metabolism 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 6
bna00630 Glyoxylate and dicarboxylate metabolism 6
bna00670 One carbon pool by folate 6
bna00785 Lipoic acid metabolism 6
bna01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 3
sot00190 Oxidative phosphorylation 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit00195 Photosynthesis 3
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit00195 Photosynthesis 3
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 3
nta00190 Oxidative phosphorylation 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
nta00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827987 100526851 101249084 103853334 7486791 11426714 107948155 107942891 125586348 106422247 102598933 127901335 102611636 107812168 107764404
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