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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102612093   serine/threonine-protein kinase ATR 
 ath-u.5   ATR   Ataxia telangiectasia-mutated and RAD3-like protein 
 bra-r.6   103864240   serine/threonine-protein kinase ATR 
 ghi-r.1   107945079   serine/threonine-protein kinase ATR 
 ghi-r.1   107932336   serine/threonine-protein kinase ATR 
 bna-r.1   106420574   serine/threonine-protein kinase ATR 
 bna-r.1   111199749   serine/threonine-protein kinase ATR 
 gma-u.5   100804117   serine/threonine-protein kinase ATR 
 vvi-u.5   100245131   serine/threonine-protein kinase ATR 
 ppo-u.5   7470423   serine/threonine-protein kinase ATR 
 mtr-u.5   11440718   serine/threonine-protein kinase ATR 
 sly-u.5   101256634   serine/threonine-protein kinase ATR 
 sot-r.1   102598035   serine/threonine-protein kinase ATR 
 nta-r.1   107796340   serine/threonine-protein kinase ATR 
 nta-r.1   107763495   serine/threonine-protein kinase ATR-like 
 osa-u.5   4342103   serine/threonine-protein kinase ATR-like 
 zma-u.5   103626462   serine/threonine-protein kinase ATR 
 tae-r.2   123171555   serine/threonine-protein kinase ATR 
 tae-r.2   123159745   serine/threonine-protein kinase ATR 
 tae-r.2   123149735   serine/threonine-protein kinase ATR 
 hvu-r.1   123407935   serine/threonine-protein kinase ATR 
 sbi-r.1   8065009   serine/threonine-protein kinase ATR 
 bdi-r.1   100846687   serine/threonine-protein kinase ATR 
 cre-r.1   CHLRE_10g467200v5   uncharacterized protein 

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Top 50 coexpressed genes to 102612093 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102612093 (cit-r.1 coexpression data)

CoexMap"102612093"


citLOC102612093 | Entrez gene ID : 102612093    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 1 2 2 1 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit03460 [list] [network] Fanconi anemia pathway (39 genes)
GO BP
GO:0000077 [list] [network] DNA damage checkpoint signaling  (20 genes)  IEA  
GO:0000723 [list] [network] telomere maintenance  (29 genes)  IEA  
GO:0006468 [list] [network] protein phosphorylation  (1088 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO MF
GO:0004674 [list] [network] protein serine/threonine kinase activity  (338 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006486675.1 [sequence] [blastp]
XP_006486676.1 [sequence] [blastp]
XP_024957998.1 [sequence] [blastp]
XP_024957999.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  nucl 1,  vacu 1  (predict for XP_006486675.1)
plas 7,  nucl 1,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_006486676.1)
plas 9,  chlo 1,  pero 1  (predict for XP_024957998.1)
plas 4,  nucl 3,  chlo 2,  mito_plas 2,  cyto_plas 2  (predict for XP_024957999.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_006486675.1)
scret 5,  other 4  (predict for XP_006486676.1)
mito 7,  other 4  (predict for XP_024957998.1)
other 4,  mito 3  (predict for XP_024957999.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102612093
ath-u.5
for
ATR
bra-r.6
for
103864240
ghi-r.1
for
107945079
ghi-r.1
for
107932336
bna-r.1
for
106420574
bna-r.1
for
111199749
gma-u.5
for
100804117
vvi-u.5
for
100245131
ppo-u.5
for
7470423
mtr-u.5
for
11440718
sly-u.5
for
101256634
sot-r.1
for
102598035
nta-r.1
for
107796340
nta-r.1
for
107763495
osa-u.5
for
4342103
zma-u.5
for
103626462
tae-r.2
for
123171555
tae-r.2
for
123159745
tae-r.2
for
123149735
hvu-r.1
for
123407935
sbi-r.1
for
8065009
bdi-r.1
for
100846687
cre-r.1
for
CHLRE_10g467200v5


Ortholog ID: 10974
Species cit ath bra ghi ghi bna bna gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102612093 ATR LOC103864240 LOC107945079 LOC107932336 LOC106420574 LOC111199749 LOC100804117 LOC100245131 LOC7470423 LOC11440718 LOC101256634 LOC102598035 LOC107796340 LOC107763495 LOC4342103 LOC103626462 LOC123171555 LOC123159745 LOC123149735 LOC123407935 LOC8065009 LOC100846687 CHLRE_10g467200v5
Function* serine/threonine-protein kinase ATR Ataxia telangiectasia-mutated and RAD3-like protein serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR-like serine/threonine-protein kinase ATR-like serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
ath03040 Spliceosome 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03020 RNA polymerase 4
ghi02010 ABC transporters 3
ghi03013 Nucleocytoplasmic transport 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi03082 ATP-dependent chromatin remodeling 4
ghi03020 RNA polymerase 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 3
bna03440 Homologous recombination 3
bna03030 DNA replication 2
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 3
bna03440 Homologous recombination 3
bna03030 DNA replication 2
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03082 ATP-dependent chromatin remodeling 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 4
ppo03013 Nucleocytoplasmic transport 3
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 3
sly03460 Fanconi anemia pathway 2
sly03013 Nucleocytoplasmic transport 2
sly03030 DNA replication 2
sly03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03430 Mismatch repair 3
sot03460 Fanconi anemia pathway 2
sot00270 Cysteine and methionine metabolism 2
sot03440 Homologous recombination 2
sot03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 4
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
nta03460 Fanconi anemia pathway 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 4
nta03460 Fanconi anemia pathway 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 3
zma00270 Cysteine and methionine metabolism 2
zma03430 Mismatch repair 2
zma03410 Base excision repair 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 5
tae03008 Ribosome biogenesis in eukaryotes 4
tae03440 Homologous recombination 3
tae03020 RNA polymerase 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 7
tae03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 6
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 7
cre03410 Base excision repair 5
cre03420 Nucleotide excision repair 4
cre03430 Mismatch repair 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102612093 834082 103864240 107945079 107932336 106420574 111199749 100804117 100245131 7470423 11440718 101256634 102598035 107796340 107763495 4342103 103626462 123171555 123159745 123149735 123407935 8065009 100846687 5724204
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