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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107932336   serine/threonine-protein kinase ATR 
 ath-u.5   ATR   Ataxia telangiectasia-mutated and RAD3-like protein 
 gma-u.5   100804117   serine/threonine-protein kinase ATR 
 vvi-u.5   100245131   serine/threonine-protein kinase ATR 
 ppo-u.5   7470423   serine/threonine-protein kinase ATR 
 mtr-u.5   11440718   serine/threonine-protein kinase ATR 
 sly-u.5   101256634   serine/threonine-protein kinase ATR 
 osa-u.5   4342103   serine/threonine-protein kinase ATR-like 
 zma-u.5   103626462   serine/threonine-protein kinase ATR 

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Top 50 coexpressed genes to 107932336 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107932336 (ghi-r.1 coexpression data)

CoexMap"107932336"


ghiLOC107932336 | Entrez gene ID : 107932336    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03460 [list] [network] Fanconi anemia pathway (91 genes)
GO BP
GO:0000077 [list] [network] DNA damage checkpoint signaling  (34 genes)  IEA  
GO:0000723 [list] [network] telomere maintenance  (36 genes)  IEA  
GO:0006468 [list] [network] protein phosphorylation  (3020 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0004674 [list] [network] protein serine/threonine kinase activity  (1166 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016719798.2 [sequence] [blastp]
XP_040938492.1 [sequence] [blastp]
XP_040938493.1 [sequence] [blastp]
XP_040938494.1 [sequence] [blastp]
XP_040938495.1 [sequence] [blastp]
XP_040938496.1 [sequence] [blastp]
XP_040938497.1 [sequence] [blastp]
XP_040938498.1 [sequence] [blastp]
XP_040938499.1 [sequence] [blastp]
XP_040938500.1 [sequence] [blastp]
XP_040938501.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  nucl 1,  cyto_E.R. 1  (predict for XP_016719798.2)
plas 4,  chlo 2,  nucl 2,  golg_plas 2,  cysk_plas 2,  E.R._plas 2,  mito_plas 2  (predict for XP_040938492.1)
nucl 4,  plas 4,  nucl_plas 4  (predict for XP_040938493.1)
nucl 4,  plas 4,  nucl_plas 4  (predict for XP_040938494.1)
nucl 5,  plas 4,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_040938495.1)
nucl 4,  chlo 1,  mito 1,  vacu 1,  chlo_mito 1  (predict for XP_040938496.1)
cyto 4,  nucl 4,  plas 1  (predict for XP_040938497.1)
cyto 4,  nucl 4,  plas 1  (predict for XP_040938498.1)
cyto 4,  nucl 4,  plas 1  (predict for XP_040938499.1)
cyto 4,  nucl 4,  plas 1  (predict for XP_040938500.1)
cyto 4,  nucl 4,  plas 1  (predict for XP_040938501.1)
Subcellular
localization
TargetP
mito 2  (predict for XP_016719798.2)
chlo 7,  other 3  (predict for XP_040938492.1)
other 9  (predict for XP_040938493.1)
other 9  (predict for XP_040938494.1)
other 8  (predict for XP_040938495.1)
other 7  (predict for XP_040938496.1)
other 8  (predict for XP_040938497.1)
other 8  (predict for XP_040938498.1)
other 8  (predict for XP_040938499.1)
other 8  (predict for XP_040938500.1)
other 8  (predict for XP_040938501.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107932336
ath-u.5
for
ATR
gma-u.5
for
100804117
vvi-u.5
for
100245131
ppo-u.5
for
7470423
mtr-u.5
for
11440718
sly-u.5
for
101256634
osa-u.5
for
4342103
zma-u.5
for
103626462


Ortholog ID: 10974
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC107945079 LOC107932336 ATR LOC103864240 LOC111199749 LOC106420574 LOC102612093 LOC100804117 LOC100245131 LOC7470423 LOC11440718 LOC101256634 LOC102598035 LOC107763495 LOC107796340 LOC4342103 LOC103626462 LOC123149735 LOC123159745 LOC123407935 LOC8065009 LOC100846687 CHLRE_10g467200v5
Function* serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR Ataxia telangiectasia-mutated and RAD3-like protein serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR-like serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR-like serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR serine/threonine-protein kinase ATR uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03020 RNA polymerase 4
ghi02010 ABC transporters 3
ghi03013 Nucleocytoplasmic transport 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi03082 ATP-dependent chromatin remodeling 4
ghi03020 RNA polymerase 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
ath03040 Spliceosome 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 3
bna03440 Homologous recombination 3
bna03030 DNA replication 2
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 3
bna03440 Homologous recombination 3
bna03030 DNA replication 2
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03082 ATP-dependent chromatin remodeling 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 4
ppo03013 Nucleocytoplasmic transport 3
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 3
sly03460 Fanconi anemia pathway 2
sly03013 Nucleocytoplasmic transport 2
sly03030 DNA replication 2
sly03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03430 Mismatch repair 3
sot03460 Fanconi anemia pathway 2
sot00270 Cysteine and methionine metabolism 2
sot03440 Homologous recombination 2
sot03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 4
nta03460 Fanconi anemia pathway 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 4
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
nta03460 Fanconi anemia pathway 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 3
zma00270 Cysteine and methionine metabolism 2
zma03430 Mismatch repair 2
zma03410 Base excision repair 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 6
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 7
tae03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 7
cre03410 Base excision repair 5
cre03420 Nucleotide excision repair 4
cre03430 Mismatch repair 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107945079 107932336 834082 103864240 111199749 106420574 102612093 100804117 100245131 7470423 11440718 101256634 102598035 107763495 107796340 4342103 103626462 123149735 123159745 123407935 8065009 100846687 5724204
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