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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1  102613799  plant UBX domain-containing protein 4 
 ath-u.5  PUX4  plant UBX domain containing protein 4 
 ath-u.5  PUX5  serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma 
 ath-u.5  PUX3  UBA/UBX domain protein 
 gma-u.5  100792095  plant UBX domain-containing protein 4 
 gma-u.5  100806361  plant UBX domain-containing protein 4 
 gma-u.5  100820141  plant UBX domain-containing protein 4 
 vvi-u.5  100262315  plant UBX domain-containing protein 4 
 vvi-u.5  100243031  plant UBX domain-containing protein 4 
 ppo-u.5  7462075  plant UBX domain-containing protein 4 
 ppo-u.5  7484546  plant UBX domain-containing protein 4 
 ppo-u.5  7489882  plant UBX domain-containing protein 4 
 mtr-u.5  11430595  plant UBX domain-containing protein 4 
 mtr-u.5  25486233  plant UBX domain-containing protein 4 
 sly-u.5  101252989  plant UBX domain-containing protein 4 
 sly-u.5  101245776  plant UBX domain-containing protein 4 
 sly-u.5  101244442  plant UBX domain-containing protein 4-like 
 osa-u.5  4336083  plant UBX domain-containing protein 4 
 zma-u.5  100283360  UBA and UBX domain-containing protein 
 zma-u.5  100282371  uncharacterized LOC100282371 

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Top 50 coexpressed genes to 102613799 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102613799 (cit-r.1 coexpression data)

CoexMap"102613799"


citLOC102613799 | Entrez gene ID : 102613799
Species cit ath gma vvi ppo mtr sly osa zma bdi hvu bra bna sbi ghi sot nta cre tae
Paralog 1 3 3 2 3 2 3 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit04141 [list] [network] Protein processing in endoplasmic reticulum (189 genes)
GO BP
GO:0031468 [list] [network] nuclear membrane reassembly  (2 genes)  IEA  
GO:0000045 [list] [network] autophagosome assembly  (22 genes)  IEA  
GO:0007030 [list] [network] Golgi organization  (25 genes)  IEA  
GO:0061025 [list] [network] membrane fusion  (45 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (119 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (791 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO MF
GO:0043130 [list] [network] ubiquitin binding  (49 genes)  IEA  
Protein XP_006467372.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto_nucl 4,  mito 2,  cyto 1,  plas 1,  chlo_mito 1,  cyto_mito 1,  golg_plas 1  (predict for XP_006467372.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_006467372.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

cit-r.1
for
102613799


ath-u.5
for
PUX4


ath-u.5
for
PUX5


ath-u.5
for
PUX3


gma-u.5
for
100792095


gma-u.5
for
100806361


gma-u.5
for
100820141


vvi-u.5
for
100262315


vvi-u.5
for
100243031


ppo-u.5
for
7462075


ppo-u.5
for
7484546


ppo-u.5
for
7489882


mtr-u.5
for
11430595


mtr-u.5
for
25486233


sly-u.5
for
101252989


sly-u.5
for
101245776


sly-u.5
for
101244442


osa-u.5
for
4336083


zma-u.5
for
100283360


zma-u.5
for
100282371



Ortholog ID: 2283
Species cit cit ath ath bra bra ghi ghi bna bna gma gma vvi vvi ppo mtr mtr sly sly sot sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol LOC102613799 LOC102619456 PUX5 PUX4 LOC103839847 LOC103859821 LOC121232134 LOC107958296 LOC106366981 LOC106437643 LOC100792095 LOC100789588 LOC100243031 LOC100262315 LOC7489882 LOC25486233 LOC11430595 LOC101244442 LOC101245776 LOC102583198 LOC102603772 LOC107784723 LOC107801130 LOC4336083 LOC100282371 LOC100283360 LOC123045694 LOC123189462 LOC123426942 LOC8057491 LOC100827538 CHLRE_01g034451v5
Function* plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma plant UBX domain containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 3 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 3 plant UBX domain-containing protein 3 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4-like plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4-like plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 uncharacterized LOC100282371 UBA and UBX domain-containing protein plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4-like plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 10
ath03040 Spliceosome 5
ath04144 Endocytosis 3
ath04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma04141 Protein processing in endoplasmic reticulum 4
gma04146 Peroxisome 2
gma03040 Spliceosome 2
gma00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 4
vvi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 5
mtr03083 Polycomb repressive complex 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 10
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 17
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 5
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
nta04712 Circadian rhythm - plant 2
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 4
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma03250 Viral life cycle - HIV-1 2
zma03050 Proteasome 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 7
zma04141 Protein processing in endoplasmic reticulum 4
zma03420 Nucleotide excision repair 3
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04075 Plant hormone signal transduction 3
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 4
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04144 Endocytosis 3
hvu03083 Polycomb repressive complex 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 12
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 7
cre04141 Protein processing in endoplasmic reticulum 5
cre04120 Ubiquitin mediated proteolysis 4
cre03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102613799 102619456 827210 825736 103839847 103859821 121232134 107958296 106366981 106437643 100792095 100789588 100243031 100262315 7489882 25486233 11430595 101244442 101245776 102583198 102603772 107784723 107801130 4336083 100282371 100283360 123045694 123189462 123426942 8057491 100827538 66052091
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