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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102614598   thymidine kinase a 
 ath-u.5   TK1a   Thymidine kinase 
 ath-u.5   TK1b   Thymidine kinase 
 bra-r.6   103859240   thymidine kinase a 
 bra-r.6   103870632   thymidine kinase a 
 ghi-r.1   107963718   thymidine kinase 
 ghi-r.1   107960161   thymidine kinase 
 ghi-r.1   107912609   thymidine kinase a 
 gma-u.5   100813201   thymidine kinase a 
 gma-u.5   100818437   thymidine kinase a 
 gma-u.5   100809756   thymidine kinase a 
 vvi-u.5   100852993   thymidine kinase 
 ppo-u.5   18106026   thymidine kinase a 
 ppo-u.5   18099758   thymidine kinase 
 mtr-u.5   112418988   thymidine kinase a 
 mtr-u.5   11436557   thymidine kinase a 
 sly-u.5   543715   TK1-like deoxyribonucleoside kinase 
 sot-r.1   102599438   thymidine kinase-like 
 sot-r.1   102591809   thymidine kinase-like 
 sot-r.1   102605312   thymidine kinase-like 
 nta-r.1   107762488   thymidine kinase-like 
 nta-r.1   107769449   thymidine kinase-like 
 nta-r.1   107789082   thymidine kinase-like 
 osa-u.5   4331376   thymidine kinase-like 
 zma-u.5   100144301   thymidine kinase 
 tae-r.2   123144030   thymidine kinase 
 tae-r.2   123182942   thymidine kinase 
 tae-r.2   123066683   thymidine kinase 
 hvu-r.1   123449331   thymidine kinase-like 
 sbi-r.1   8066225   thymidine kinase 
 bdi-r.1   100835449   thymidine kinase 
 cre-r.1   CHLRE_03g192600v5   uncharacterized protein 

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Top 50 coexpressed genes to 102614598 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102614598 (cit-r.1 coexpression data)

CoexMap"102614598"


citLOC102614598 | Entrez gene ID : 102614598      
Species cit ath bra ghi gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre bna
Paralog 1 2 2 3 3 1 2 2 1 3 3 1 1 3 1 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit00240 [list] [network] Pyrimidine metabolism (55 genes)
cit01232 [list] [network] Nucleotide metabolism (72 genes)
GO BP
GO:0046104 [list] [network] thymidine metabolic process  (2 genes)  IEA  
GO CC
GO MF
GO:0004797 [list] [network] thymidine kinase activity  (2 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1864 genes)  IEA  
Protein XP_006469524.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 6,  cyto 3,  cysk 1,  cysk_nucl 1  (predict for XP_006469524.1)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for XP_006469524.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102614598
ath-u.5
for
TK1a
ath-u.5
for
TK1b
bra-r.6
for
103859240
bra-r.6
for
103870632
ghi-r.1
for
107963718
ghi-r.1
for
107960161
ghi-r.1
for
107912609
gma-u.5
for
100813201
gma-u.5
for
100818437
gma-u.5
for
100809756
vvi-u.5
for
100852993
ppo-u.5
for
18106026
ppo-u.5
for
18099758
mtr-u.5
for
112418988
mtr-u.5
for
11436557
sly-u.5
for
543715
sot-r.1
for
102599438
sot-r.1
for
102591809
sot-r.1
for
102605312
nta-r.1
for
107762488
nta-r.1
for
107769449
nta-r.1
for
107789082
osa-u.5
for
4331376
zma-u.5
for
100144301
tae-r.2
for
123144030
tae-r.2
for
123182942
tae-r.2
for
123066683
hvu-r.1
for
123449331
sbi-r.1
for
8066225
bdi-r.1
for
100835449
cre-r.1
for
CHLRE_03g192600v5


Ortholog ID: 3682
Species cit ath ath bra bra ghi ghi ghi bna gma gma gma vvi ppo ppo mtr mtr sly sot sot sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102614598 TK1a TK1b LOC103859240 LOC103860530 LOC107963718 LOC107960161 LOC107922966 LOC106401596 LOC100818437 LOC100809756 LOC100781341 LOC100852993 LOC18106026 LOC18099758 LOC112418988 LOC11436557 LOC543715 LOC102599438 LOC102591809 LOC102605312 LOC107762488 LOC107769449 LOC107789082 LOC4331376 LOC100144301 LOC123144030 LOC123182942 LOC123066683 LOC123449331 LOC8066225 LOC100835449 CHLRE_03g192600v5
Function* thymidine kinase a Thymidine kinase Thymidine kinase thymidine kinase a thymidine kinase b thymidine kinase thymidine kinase thymidine kinase a thymidine kinase a thymidine kinase a thymidine kinase a thymidine kinase a thymidine kinase thymidine kinase a thymidine kinase thymidine kinase a thymidine kinase a TK1-like deoxyribonucleoside kinase thymidine kinase-like thymidine kinase-like thymidine kinase-like thymidine kinase-like thymidine kinase-like thymidine kinase-like thymidine kinase-like thymidine kinase thymidine kinase thymidine kinase thymidine kinase thymidine kinase-like thymidine kinase thymidine kinase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 5
ath03030 DNA replication 3
ath03420 Nucleotide excision repair 3
ath03410 Base excision repair 3
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03440 Homologous recombination 4
bra03030 DNA replication 3
bra03460 Fanconi anemia pathway 3
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 5
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 5
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 7
ghi01232 Nucleotide metabolism 7
ghi00230 Purine metabolism 5
ghi00480 Glutathione metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 5
bna01232 Nucleotide metabolism 5
bna03440 Homologous recombination 3
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma00240 Pyrimidine metabolism 4
gma01232 Nucleotide metabolism 4
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 4
gma01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 5
gma03420 Nucleotide excision repair 3
gma03430 Mismatch repair 3
gma03440 Homologous recombination 3
gma00240 Pyrimidine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 5
vvi03420 Nucleotide excision repair 4
vvi00240 Pyrimidine metabolism 3
vvi01232 Nucleotide metabolism 3
vvi03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 5
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
sly03460 Fanconi anemia pathway 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00240 Pyrimidine metabolism 2
sot01232 Nucleotide metabolism 2
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 3
sot00240 Pyrimidine metabolism 2
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 4
nta01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 4
nta01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 4
nta01232 Nucleotide metabolism 4
nta03082 ATP-dependent chromatin remodeling 2
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 13
osa01230 Biosynthesis of amino acids 4
osa00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae03008 Ribosome biogenesis in eukaryotes 3
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae00280 Valine, leucine and isoleucine degradation 3
tae00410 beta-Alanine metabolism 3
tae00640 Propanoate metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae03008 Ribosome biogenesis in eukaryotes 3
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00240 Pyrimidine metabolism 4
bdi01240 Biosynthesis of cofactors 3
bdi01230 Biosynthesis of amino acids 3
bdi00250 Alanine, aspartate and glutamate metabolism 2
bdi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102614598 819971 832371 103859240 103860530 107963718 107960161 107922966 106401596 100818437 100809756 100781341 100852993 18106026 18099758 112418988 11436557 543715 102599438 102591809 102605312 107762488 107769449 107789082 4331376 100144301 123144030 123182942 123066683 123449331 8066225 100835449 5718689
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