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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102615320   pentatricopeptide repeat-containing protein At5g25630 
 cit-r.1   102619696   pentatricopeptide repeat-containing protein At5g21222-like 
 cit-r.1   102617477   probable serine/threonine-protein kinase PBL7 
 ath-u.5   AT5G21222   protein kinase family protein 
 ath-u.5   AT5G25630   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103837095   pentatricopeptide repeat-containing protein At5g25630 
 bra-r.6   103845601   pentatricopeptide repeat-containing protein At5g21222 
 ghi-r.1   121204811   pentatricopeptide repeat-containing protein At5g25630 
 ghi-r.1   107901241   pentatricopeptide repeat-containing protein At5g21222 
 ghi-r.1   121220023   pentatricopeptide repeat-containing protein At5g25630 
 bna-r.1   106440370   pentatricopeptide repeat-containing protein At5g25630 
 bna-r.1   106421297   pentatricopeptide repeat-containing protein At5g21222 
 bna-r.1   106371684   pentatricopeptide repeat-containing protein At5g21222-like 
 gma-u.5   100820389   pentatricopeptide repeat-containing protein At5g21222 
 gma-u.5   100809945   pentatricopeptide repeat-containing protein At5g21222 
 gma-u.5   100779093   pentatricopeptide repeat-containing protein At5g25630 
 vvi-u.5   100267944   pentatricopeptide repeat-containing protein At5g25630 
 vvi-u.5   100247419   pentatricopeptide repeat-containing protein At5g25630 
 ppo-u.5   7476286   pentatricopeptide repeat-containing protein At5g21222 
 ppo-u.5   7458979   pentatricopeptide repeat-containing protein At5g25630 
 mtr-u.5   11417004   pentatricopeptide repeat-containing protein At5g21222 
 mtr-u.5   11425664   pentatricopeptide repeat-containing protein At5g25630 
 sly-u.5   101267036   pentatricopeptide repeat-containing protein At5g21222 
 sly-u.5   101258289   pentatricopeptide repeat-containing protein At5g25630 
 sot-r.1   102578994   pentatricopeptide repeat-containing protein At5g25630-like 
 sot-r.1   102591702   pentatricopeptide repeat-containing protein At5g25630 
 nta-r.1   107815568   uncharacterized LOC107815568 
 nta-r.1   107774206   uncharacterized LOC107774206 
 nta-r.1   107768251   uncharacterized LOC107768251 
 osa-u.5   4327187   pentatricopeptide repeat-containing protein At5g25630 
 zma-u.5   100273524   uncharacterized LOC100273524 
 tae-r.2   123077862   pentatricopeptide repeat-containing protein At5g25630 
 tae-r.2   123060782   pentatricopeptide repeat-containing protein At5g25630 
 tae-r.2   123069347   pentatricopeptide repeat-containing protein At5g25630 
 hvu-r.1   123443241   pentatricopeptide repeat-containing protein At5g25630-like 
 sbi-r.1   8083251   pentatricopeptide repeat-containing protein At5g25630 
 bdi-r.1   100834484   pentatricopeptide repeat-containing protein At5g25630 

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Top 50 coexpressed genes to 102615320 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102615320 (cit-r.1 coexpression data)

CoexMap"102615320"


citLOC102615320 | Entrez gene ID : 102615320    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 2 3 3 3 2 2 2 2 2 3 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006476139.2 [sequence] [blastp]
XP_006476140.2 [sequence] [blastp]
XP_052295511.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 2,  cysk_nucl 2,  chlo 1,  cysk 1,  nucl_plas 1,  cyto_pero 1  (predict for XP_006476139.2)
nucl 3,  cyto 2,  cysk_nucl 2,  chlo 1,  cysk 1,  nucl_plas 1,  cyto_pero 1  (predict for XP_006476140.2)
nucl 3,  cyto 2,  cysk_nucl 2,  chlo 1,  cysk 1,  nucl_plas 1,  cyto_pero 1  (predict for XP_052295511.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006476139.2)
other 8  (predict for XP_006476140.2)
other 8  (predict for XP_052295511.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102615320
cit-r.1
for
102619696
cit-r.1
for
102617477
ath-u.5
for
AT5G21222
ath-u.5
for
AT5G25630
bra-r.6
for
103837095
bra-r.6
for
103845601
ghi-r.1
for
121204811
ghi-r.1
for
107901241
ghi-r.1
for
121220023
bna-r.1
for
106440370
bna-r.1
for
106421297
bna-r.1
for
106371684
gma-u.5
for
100820389
gma-u.5
for
100809945
gma-u.5
for
100779093
vvi-u.5
for
100267944
vvi-u.5
for
100247419
ppo-u.5
for
7476286
ppo-u.5
for
7458979
mtr-u.5
for
11417004
mtr-u.5
for
11425664
sly-u.5
for
101267036
sly-u.5
for
101258289
sot-r.1
for
102578994
sot-r.1
for
102591702
nta-r.1
for
107815568
nta-r.1
for
107774206
nta-r.1
for
107768251
osa-u.5
for
4327187
zma-u.5
for
100273524
tae-r.2
for
123077862
tae-r.2
for
123060782
tae-r.2
for
123069347
hvu-r.1
for
123443241
sbi-r.1
for
8083251
bdi-r.1
for
100834484


Ortholog ID: 4974
Species cit cit cit ath ath bra bra ghi ghi ghi bna bna bna gma gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC102615320 LOC102619696 LOC102617477 AT5G21222 AT5G25630 LOC103837095 LOC103845601 LOC121204811 LOC107901241 LOC121230433 LOC106440370 LOC106421297 LOC106371684 LOC100820389 LOC100809945 LOC100779093 LOC100267944 LOC100247419 LOC7476286 LOC7458979 LOC11417004 LOC11425664 LOC101267036 LOC101258289 LOC102578994 LOC102591702 LOC107815568 LOC107768251 LOC107811608 LOC4327187 LOC100273524 LOC123077862 LOC123060782 LOC123069347 LOC123443241 LOC8083251 LOC100834484
Function* pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g21222-like probable serine/threonine-protein kinase PBL7 protein kinase family protein Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g21222 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g21222 pentatricopeptide repeat-containing protein At5g21222 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g21222 pentatricopeptide repeat-containing protein At5g21222-like pentatricopeptide repeat-containing protein At5g21222 pentatricopeptide repeat-containing protein At5g21222 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g21222 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g21222 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g21222 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g25630-like pentatricopeptide repeat-containing protein At5g25630 uncharacterized LOC107815568 uncharacterized LOC107768251 uncharacterized LOC107811608 pentatricopeptide repeat-containing protein At5g25630 uncharacterized LOC100273524 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g25630-like pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g25630
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00902 Monoterpenoid biosynthesis 2
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 2
bna00030 Pentose phosphate pathway 2
bna00051 Fructose and mannose metabolism 2
bna00710 Carbon fixation by Calvin cycle 2
bna01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 6
gma01200 Carbon metabolism 6
gma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
ppo00860 Porphyrin metabolism 2
ppo00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00906 Carotenoid biosynthesis 2
sly04075 Plant hormone signal transduction 2
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00906 Carotenoid biosynthesis 2
sot04075 Plant hormone signal transduction 2
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 7
tae01200 Carbon metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 5
tae01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 6
tae01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 3
sbi00710 Carbon fixation by Calvin cycle 2
sbi00860 Porphyrin metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102615320 102619696 102617477 832244 832639 103837095 103845601 121204811 107901241 121230433 106440370 106421297 106371684 100820389 100809945 100779093 100267944 100247419 7476286 7458979 11417004 11425664 101267036 101258289 102578994 102591702 107815568 107768251 107811608 4327187 100273524 123077862 123060782 123069347 123443241 8083251 100834484
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