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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8083251   pentatricopeptide repeat-containing protein At5g25630 
 zma-u.5   100273524   uncharacterized LOC100273524 
 osa-u.5   4327187   pentatricopeptide repeat-containing protein At5g25630 
 ath-u.5   AT5G21222   protein kinase family protein 
 ath-u.5   AT5G25630   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100820389   pentatricopeptide repeat-containing protein At5g21222 
 gma-u.5   100809945   pentatricopeptide repeat-containing protein At5g21222 
 gma-u.5   100779093   pentatricopeptide repeat-containing protein At5g25630 
 sly-u.5   101267036   pentatricopeptide repeat-containing protein At5g21222 
 sly-u.5   101258289   pentatricopeptide repeat-containing protein At5g25630 
 vvi-u.5   100267944   pentatricopeptide repeat-containing protein At5g25630 
 vvi-u.5   100247419   pentatricopeptide repeat-containing protein At5g25630 
 ppo-u.5   7458979   pentatricopeptide repeat-containing protein At5g25630 
 ppo-u.5   7476286   pentatricopeptide repeat-containing protein At5g21222 
 mtr-u.5   11425664   pentatricopeptide repeat-containing protein At5g25630 
 mtr-u.5   11417004   pentatricopeptide repeat-containing protein At5g21222 

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Top 50 coexpressed genes to 8083251 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8083251 (sbi-r.1 coexpression data)

CoexMap"8083251"


sbiLOC8083251 | Entrez gene ID : 8083251      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 2 3 2 2 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002462511.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 2,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_002462511.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002462511.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8083251

.
zma-u.5
for
100273524

.
osa-u.5
for
4327187

.
ath-u.5
for
AT5G21222

.
ath-u.5
for
AT5G25630

.
gma-u.5
for
100820389

.
gma-u.5
for
100809945

.
gma-u.5
for
100779093

.
sly-u.5
for
101267036

.
sly-u.5
for
101258289

.
vvi-u.5
for
100267944

.
vvi-u.5
for
100247419

.
ppo-u.5
for
7458979

.
ppo-u.5
for
7476286

.
mtr-u.5
for
11425664

.
mtr-u.5
for
11417004

.


Ortholog ID: 4974
Species ath ath gma gma sly sly osa zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol AT5G25630 AT5G21222 LOC100779093 LOC100820389 LOC101258289 LOC101267036 LOC4327187 LOC100273524 LOC103837095 LOC103845601 LOC100247419 LOC100267944 LOC7476286 LOC7458979 LOC11425664 LOC11417004 LOC123060782 LOC123069347 LOC123443241 LOC107901241 LOC121204811 LOC106421297 LOC106371684 LOC8083251 LOC102578994 LOC102591702 LOC102615320 LOC102619696 LOC100834484 LOC107811608 LOC107815568
Function* Tetratricopeptide repeat (TPR)-like superfamily protein protein kinase family protein pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g21222 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g21222 pentatricopeptide repeat-containing protein At5g25630 uncharacterized LOC100273524 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g21222 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g21222 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g21222 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g25630-like pentatricopeptide repeat-containing protein At5g21222 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g21222 pentatricopeptide repeat-containing protein At5g21222-like pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g25630-like pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g25630 pentatricopeptide repeat-containing protein At5g21222-like pentatricopeptide repeat-containing protein At5g25630 uncharacterized LOC107811608 uncharacterized LOC107815568
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 6
gma01200 Carbon metabolism 6
gma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00906 Carotenoid biosynthesis 2
sly04075 Plant hormone signal transduction 2
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
ppo00860 Porphyrin metabolism 2
ppo00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 5
tae01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 6
tae01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 3
sbi00710 Carbon fixation by Calvin cycle 2
sbi00860 Porphyrin metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00906 Carotenoid biosynthesis 2
sot04075 Plant hormone signal transduction 2
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00902 Monoterpenoid biosynthesis 2
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832639 832244 100779093 100820389 101258289 101267036 4327187 100273524 103837095 103845601 100247419 100267944 7476286 7458979 11425664 11417004 123060782 123069347 123443241 107901241 121204811 106421297 106371684 8083251 102578994 102591702 102615320 102619696 100834484 107811608 107815568
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