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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1  102615852  pentatricopeptide repeat-containing protein At5g59600 
 bra-r.6  103845380  pentatricopeptide repeat-containing protein At5g59600 
 bna-r.1  106417721  pentatricopeptide repeat-containing protein At5g59600-like 
 bna-r.1  106420548  pentatricopeptide repeat-containing protein At5g59600-like 
 gma-u.5  100790576  pentatricopeptide repeat-containing protein At5g59600 
 vvi-u.5  100253590  pentatricopeptide repeat-containing protein At5g59600 
 mtr-u.5  11412265  pentatricopeptide repeat-containing protein At5g59600 
 nta-r.1  107763203  pentatricopeptide repeat-containing protein At5g59600-like 
 osa-u.5  4332390  pentatricopeptide repeat-containing protein At5g59600 
 zma-u.5  100280408  pentatricopeptide repeat protein PPR868-14 
 tae-r.2  123092611  pentatricopeptide repeat-containing protein At5g59600 
 hvu-r.1  123449032  pentatricopeptide repeat-containing protein At5g59600-like 

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Top 50 coexpressed genes to 102615852 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102615852 (cit-r.1 coexpression data)

CoexMap"102615852"


citLOC102615852 | Entrez gene ID : 102615852
Species cit bra bna gma vvi mtr nta osa zma tae hvu sot bdi sly ppo cre sbi ath ghi
Paralog 1 1 2 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (369 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006488668.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 2,  cyto 1,  mito_plas 1  (predict for XP_006488668.3)
Subcellular
localization
TargetP
mito 7,  other 4  (predict for XP_006488668.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

cit-r.1
for
102615852


bra-r.6
for
103845380


bna-r.1
for
106417721


bna-r.1
for
106420548


gma-u.5
for
100790576


vvi-u.5
for
100253590


mtr-u.5
for
11412265


nta-r.1
for
107763203


osa-u.5
for
4332390


zma-u.5
for
100280408


tae-r.2
for
123092611


hvu-r.1
for
123449032



Ortholog ID: 11766
Species cit bra bna bna gma vvi mtr nta osa zma tae hvu
Symbol LOC102615852 LOC103845380 LOC106417721 LOC106420548 LOC100790576 LOC100253590 LOC11412265 LOC107763203 LOC4332390 LOC100280408 LOC123092611 LOC123449032
Function* pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat-containing protein At5g59600-like pentatricopeptide repeat-containing protein At5g59600-like pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat-containing protein At5g59600-like pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat protein PPR868-14 pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat-containing protein At5g59600-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102615852 103845380 106417721 106420548 100790576 100253590 11412265 107763203 4332390 100280408 123092611 123449032
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