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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106417721   pentatricopeptide repeat-containing protein At5g59600-like 
 bna-r.1   106420548   pentatricopeptide repeat-containing protein At5g59600-like 
 bra-r.6   103845380   pentatricopeptide repeat-containing protein At5g59600 
 cit-r.1   102615852   pentatricopeptide repeat-containing protein At5g59600 
 gma-u.5   100790576   pentatricopeptide repeat-containing protein At5g59600 
 vvi-u.5   100253590   pentatricopeptide repeat-containing protein At5g59600 
 mtr-u.5   11412265   pentatricopeptide repeat-containing protein At5g59600 
 nta-r.1   107763203   pentatricopeptide repeat-containing protein At5g59600-like 
 osa-u.5   4332390   pentatricopeptide repeat-containing protein At5g59600 
 zma-u.5   100280408   pentatricopeptide repeat protein PPR868-14 
 tae-r.2   123092611   pentatricopeptide repeat-containing protein At5g59600 
 hvu-r.1   123449032   pentatricopeptide repeat-containing protein At5g59600-like 

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Top 50 coexpressed genes to 106417721 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106417721 (bna-r.1 coexpression data)

CoexMap""


bnaLOC106417721 | Entrez gene ID : 106417721    
Species bna bra cit gma vvi mtr nta osa zma tae hvu bdi sot sly ath sbi ghi cre ppo
Paralog 2 1 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function pentatricopeptide repeat-containing protein At5g59600-like
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (870 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_048624928.1 [sequence] [blastp]
XP_048624929.1 [sequence] [blastp]
XP_048624930.1 [sequence] [blastp]
XP_048624931.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  nucl 1,  cyto 1,  plas 1,  extr 1,  cyto_nucl 1,  cyto_mito 1,  nucl_plas 1,  cyto_plas 1  (predict for XP_048624928.1)
chlo 6,  mito 1,  nucl 1,  cyto 1,  plas 1,  extr 1,  cyto_nucl 1,  cyto_mito 1,  nucl_plas 1,  cyto_plas 1  (predict for XP_048624929.1)
chlo 6,  mito 1,  nucl 1,  cyto 1,  plas 1,  extr 1,  cyto_nucl 1,  cyto_mito 1,  nucl_plas 1,  cyto_plas 1  (predict for XP_048624930.1)
chlo 6,  mito 1,  nucl 1,  cyto 1,  plas 1,  extr 1,  cyto_nucl 1,  cyto_mito 1,  nucl_plas 1,  cyto_plas 1  (predict for XP_048624931.1)
Subcellular
localization
TargetP
scret 3  (predict for XP_048624928.1)
scret 3  (predict for XP_048624929.1)
scret 3  (predict for XP_048624930.1)
scret 3  (predict for XP_048624931.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106417721
bna-r.1
for
106420548
bra-r.6
for
103845380
cit-r.1
for
102615852
gma-u.5
for
100790576
vvi-u.5
for
100253590
mtr-u.5
for
11412265
nta-r.1
for
107763203
osa-u.5
for
4332390
zma-u.5
for
100280408
tae-r.2
for
123092611
hvu-r.1
for
123449032

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Ortholog ID: 11766
Species bna bna bra cit gma vvi mtr nta osa zma tae hvu
Symbol LOC106417721 LOC106420548 LOC103845380 LOC102615852 LOC100790576 LOC100253590 LOC11412265 LOC107763203 LOC4332390 LOC100280408 LOC123092611 LOC123449032
Function* pentatricopeptide repeat-containing protein At5g59600-like pentatricopeptide repeat-containing protein At5g59600-like pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat-containing protein At5g59600-like pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat protein PPR868-14 pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat-containing protein At5g59600-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106417721 106420548 103845380 102615852 100790576 100253590 11412265 107763203 4332390 100280408 123092611 123449032
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