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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   RECQI1   RECQ helicase l1 
 bra-r.6   103870802   ATP-dependent DNA helicase Q-like 1 
 ghi-r.1   107927199   ATP-dependent DNA helicase Q-like 1 
 ghi-r.1   107887081   ATP-dependent DNA helicase Q-like 1 
 bna-r.1   106397655   ATP-dependent DNA helicase Q-like 1 
 bna-r.1   111213576   ATP-dependent DNA helicase Q-like 1 
 gma-u.5   100806070   ATP-dependent DNA helicase Q-like 1 
 vvi-u.5   100252922   ATP-dependent DNA helicase Q-like 1 
 mtr-u.5   11408014   ATP-dependent DNA helicase Q-like 1 
 sly-u.5   101268516   ATP-dependent DNA helicase Q-like 1 
 sot-r.1   102600231   ATP-dependent DNA helicase Q-like 1 
 nta-r.1   107814297   ATP-dependent DNA helicase Q-like 1 
 nta-r.1   107793571   ATP-dependent DNA helicase Q-like 1 
 zma-u.5   103652713   ATP-dependent DNA helicase Q-like 1 
 tae-r.2   123096845   ATP-dependent DNA helicase Q-like 1 
 tae-r.2   123091608   ATP-dependent DNA helicase Q-like 1 
 tae-r.2   123086217   ATP-dependent DNA helicase Q-like 1 
 hvu-r.1   123448388   ATP-dependent DNA helicase Q-like 1 
 bdi-r.1   100824532   ATP-dependent DNA helicase Q-like 1 
 cre-r.1   CHLRE_03g178950v5   uncharacterized protein 

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Top 50 coexpressed genes to RECQI1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RECQI1 (ath-u.5 coexpression data)

CoexMap"102615882"


citLOC102615882 | Entrez gene ID : 102615882    
Species ath bra ghi bna gma vvi mtr sly sot nta zma tae hvu bdi cre ppo cit osa sbi
Paralog 1 1 2 2 1 1 1 1 1 2 1 3 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (65 genes)  IEA  
GO CC
GO:0005694 [list] [network] chromosome  (273 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4272 genes)  IEA  
GO MF
GO:0009378 [list] [network] four-way junction helicase activity  (8 genes)  IEA  
GO:0043138 [list] [network] 3'-5' DNA helicase activity  (13 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1864 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3051 genes)  IEA  
Protein XP_052296497.1 [sequence] [blastp]
XP_052296498.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  mito 1,  plas 1,  mito_plas 1  (predict for XP_052296497.1)
nucl 10  (predict for XP_052296498.1)
Subcellular
localization
TargetP
other 8  (predict for XP_052296497.1)
other 9  (predict for XP_052296498.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
RECQI1
bra-r.6
for
103870802
ghi-r.1
for
107927199
ghi-r.1
for
107887081
bna-r.1
for
106397655
bna-r.1
for
111213576
gma-u.5
for
100806070
vvi-u.5
for
100252922
mtr-u.5
for
11408014
sly-u.5
for
101268516
sot-r.1
for
102600231
nta-r.1
for
107814297
nta-r.1
for
107793571
zma-u.5
for
103652713
tae-r.2
for
123096845
tae-r.2
for
123091608
tae-r.2
for
123086217
hvu-r.1
for
123448388
bdi-r.1
for
100824532
cre-r.1
for
CHLRE_03g178950v5


Ortholog ID: 10734
Species ath bra ghi ghi bna bna gma vvi mtr sly sot nta nta zma tae tae tae hvu bdi cre
Symbol RECQI1 LOC103870802 LOC107927199 LOC107887081 LOC106397655 LOC111213576 LOC100806070 LOC100252922 LOC11408014 LOC101268516 LOC102600231 LOC107814297 LOC107793571 LOC103652713 LOC123096845 LOC123091608 LOC123086217 LOC123448388 LOC100824532 CHLRE_03g178950v5
Function* RECQ helicase l1 ATP-dependent DNA helicase Q-like 1 ATP-dependent DNA helicase Q-like 1 ATP-dependent DNA helicase Q-like 1 ATP-dependent DNA helicase Q-like 1 ATP-dependent DNA helicase Q-like 1 ATP-dependent DNA helicase Q-like 1 ATP-dependent DNA helicase Q-like 1 ATP-dependent DNA helicase Q-like 1 ATP-dependent DNA helicase Q-like 1 ATP-dependent DNA helicase Q-like 1 ATP-dependent DNA helicase Q-like 1 ATP-dependent DNA helicase Q-like 1 ATP-dependent DNA helicase Q-like 1 ATP-dependent DNA helicase Q-like 1 ATP-dependent DNA helicase Q-like 1 ATP-dependent DNA helicase Q-like 1 ATP-dependent DNA helicase Q-like 1 ATP-dependent DNA helicase Q-like 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 10
ghi03440 Homologous recombination 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03440 Homologous recombination 3
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 11
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 9
sot03460 Fanconi anemia pathway 3
sot03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 9
nta03460 Fanconi anemia pathway 4
nta03430 Mismatch repair 3
nta03420 Nucleotide excision repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 9
nta03460 Fanconi anemia pathway 4
nta03430 Mismatch repair 3
nta03420 Nucleotide excision repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 5
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 7
bdi03430 Mismatch repair 2
bdi03440 Homologous recombination 2
bdi00270 Cysteine and methionine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819743 103870802 107927199 107887081 106397655 111213576 100806070 100252922 11408014 101268516 102600231 107814297 107793571 103652713 123096845 123091608 123086217 123448388 100824532 5728811
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