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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102616652   zinc finger CCCH domain-containing protein 55 
 ath-u.5   AT5G12440   CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein 
 bra-r.6   103846638   zinc finger CCCH domain-containing protein 55 
 bra-r.6   103855979   zinc finger CCCH domain-containing protein 55-like 
 ghi-r.1   107953064   zinc finger CCCH domain-containing protein 55 
 ghi-r.1   107891430   zinc finger CCCH domain-containing protein 55 
 ghi-r.1   107889308   zinc finger CCCH domain-containing protein 55 
 bna-r.1   106454636   zinc finger CCCH domain-containing protein 55 
 bna-r.1   106431899   zinc finger CCCH domain-containing protein 55 
 bna-r.1   106372369   zinc finger CCCH domain-containing protein 55 
 gma-u.5   100818923   zinc finger CCCH domain-containing protein 55 
 gma-u.5   100778061   zinc finger CCCH domain-containing protein 55 
 ppo-u.5   7467974   zinc finger CCCH domain-containing protein 55 
 ppo-u.5   7467382   zinc finger CCCH domain-containing protein 55 
 mtr-u.5   11442586   zinc finger CCCH domain-containing protein 55 

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Top 50 coexpressed genes to 102616652 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102616652 (cit-r.1 coexpression data)

CoexMap"102616652"


citLOC102616652 | Entrez gene ID : 102616652      
Species cit ath bra ghi bna gma ppo mtr osa nta bdi vvi sot tae sly zma hvu sbi cre
Paralog 1 1 2 3 3 2 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (1833 genes)  IEA  
Protein XP_006470661.1 [sequence] [blastp]
XP_006470662.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_006470661.1)
nucl 9  (predict for XP_006470662.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006470661.1)
other 9  (predict for XP_006470662.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102616652
ath-u.5
for
AT5G12440
bra-r.6
for
103846638
bra-r.6
for
103855979
ghi-r.1
for
107953064
ghi-r.1
for
107891430
ghi-r.1
for
107889308
bna-r.1
for
106454636
bna-r.1
for
106431899
bna-r.1
for
106372369
gma-u.5
for
100818923
gma-u.5
for
100778061
ppo-u.5
for
7467974
ppo-u.5
for
7467382
mtr-u.5
for
11442586


Ortholog ID: 12924
Species cit ath bra bra ghi ghi ghi bna bna bna gma gma ppo ppo mtr
Symbol LOC102616652 AT5G12440 LOC103846638 LOC103855979 LOC107953064 LOC107889308 LOC107954299 LOC106454636 LOC106431899 LOC106372369 LOC100818923 LOC100778061 LOC7467974 LOC7467382 LOC11442586
Function* zinc finger CCCH domain-containing protein 55 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 55-like zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 55
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 2
bna03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 3
bna03420 Nucleotide excision repair 3
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 3
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102616652 831119 103846638 103855979 107953064 107889308 107954299 106454636 106431899 106372369 100818923 100778061 7467974 7467382 11442586
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