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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102617495   DNA topoisomerase 6 subunit A 
 ath-u.5   RHL2   Spo11/DNA topoisomerase VI, subunit A protein 
 bra-r.6   103847420   DNA topoisomerase 6 subunit A 
 ghi-r.1   107898500   DNA topoisomerase 6 subunit A 
 bna-r.1   106450521   DNA topoisomerase 6 subunit A 
 bna-r.1   106372606   DNA topoisomerase 6 subunit A-like 
 bna-r.1   125579114   DNA topoisomerase 6 subunit A-like 
 gma-u.5   100782577   DNA topoisomerase 6 subunit A 
 gma-u.5   100778158   DNA topoisomerase 6 subunit A 
 vvi-u.5   100260201   DNA topoisomerase 6 subunit A 
 ppo-u.5   18100243   DNA topoisomerase 6 subunit A 
 mtr-u.5   25484058   DNA topoisomerase 6 subunit A 
 sly-u.5   101260755   DNA topoisomerase 6 subunit A 
 sot-r.1   102606419   DNA topoisomerase 6 subunit A 
 nta-r.1   107786355   DNA topoisomerase 6 subunit A-like 
 nta-r.1   107791525   DNA topoisomerase 6 subunit A 
 osa-u.5   SPO11-3   Topoisomerase 6 subunit A3 
 zma-u.5   100273699   uncharacterized LOC100273699 
 tae-r.2   123097819   DNA topoisomerase 6 subunit A3 
 tae-r.2   123092505   DNA topoisomerase 6 subunit A3 
 tae-r.2   123085530   DNA topoisomerase 6 subunit A3 
 hvu-r.1   123448950   DNA topoisomerase 6 subunit A3 
 sbi-r.1   8084884   DNA topoisomerase 6 subunit A3 
 bdi-r.1   100839132   DNA topoisomerase 6 subunit A3 
 cre-r.1   CHLRE_02g084800v5   uncharacterized protein 

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Top 50 coexpressed genes to 102617495 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102617495 (cit-r.1 coexpression data)

CoexMap"102617495"


citLOC102617495 | Entrez gene ID : 102617495    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 1 1 3 2 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000706 [list] [network] meiotic DNA double-strand break processing  (3 genes)  IEA  
GO:0006265 [list] [network] DNA topological change  (10 genes)  IEA  
GO:0042138 [list] [network] meiotic DNA double-strand break formation  (10 genes)  IEA  
GO:0007131 [list] [network] reciprocal meiotic recombination  (31 genes)  IEA  
GO CC
GO:0000228 [list] [network] nuclear chromosome  (76 genes)  IEA  
GO MF
GO:0003918 [list] [network] DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity  (7 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1476 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1864 genes)  IEA  
Protein XP_006480568.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  cyto 3,  pero 1,  cysk 1,  golg_plas 1  (predict for XP_006480568.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006480568.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102617495
ath-u.5
for
RHL2
bra-r.6
for
103847420
ghi-r.1
for
107898500
bna-r.1
for
106450521
bna-r.1
for
106372606
bna-r.1
for
125579114
gma-u.5
for
100782577
gma-u.5
for
100778158
vvi-u.5
for
100260201
ppo-u.5
for
18100243
mtr-u.5
for
25484058
sly-u.5
for
101260755
sot-r.1
for
102606419
nta-r.1
for
107786355
nta-r.1
for
107791525
osa-u.5
for
SPO11-3
zma-u.5
for
100273699
tae-r.2
for
123097819
tae-r.2
for
123092505
tae-r.2
for
123085530
hvu-r.1
for
123448950
sbi-r.1
for
8084884
bdi-r.1
for
100839132
cre-r.1
for
CHLRE_02g084800v5


Ortholog ID: 10298
Species cit ath bra ghi bna bna bna gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102617495 RHL2 LOC103847420 LOC107898500 LOC106450521 LOC106372606 LOC125579114 LOC100782577 LOC100778158 LOC100260201 LOC18100243 LOC25484058 LOC101260755 LOC102606419 LOC107786355 LOC107791525 SPO11-3 LOC100273699 LOC123097819 LOC123092505 LOC123085530 LOC123448950 LOC8084884 LOC100839132 CHLRE_02g084800v5
Function* DNA topoisomerase 6 subunit A Spo11/DNA topoisomerase VI, subunit A protein DNA topoisomerase 6 subunit A DNA topoisomerase 6 subunit A DNA topoisomerase 6 subunit A DNA topoisomerase 6 subunit A-like DNA topoisomerase 6 subunit A-like DNA topoisomerase 6 subunit A DNA topoisomerase 6 subunit A DNA topoisomerase 6 subunit A DNA topoisomerase 6 subunit A DNA topoisomerase 6 subunit A DNA topoisomerase 6 subunit A DNA topoisomerase 6 subunit A DNA topoisomerase 6 subunit A-like DNA topoisomerase 6 subunit A Topoisomerase 6 subunit A3 uncharacterized LOC100273699 DNA topoisomerase 6 subunit A3 DNA topoisomerase 6 subunit A3 DNA topoisomerase 6 subunit A3 DNA topoisomerase 6 subunit A3 DNA topoisomerase 6 subunit A3 DNA topoisomerase 6 subunit A3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 4
cit01210 2-Oxocarboxylic acid metabolism 3
cit00270 Cysteine and methionine metabolism 3
cit03010 Ribosome 3
cit00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
ath03030 DNA replication 3
ath03410 Base excision repair 3
ath03430 Mismatch repair 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04145 Phagosome 8
bna04517 IgSF CAM signaling 8
bna04814 Motor proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04145 Phagosome 6
bna04517 IgSF CAM signaling 6
bna04814 Motor proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04145 Phagosome 6
bna04517 IgSF CAM signaling 6
bna04814 Motor proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi00260 Glycine, serine and threonine metabolism 3
vvi01230 Biosynthesis of amino acids 3
vvi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03040 Spliceosome 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00261 Monobactam biosynthesis 2
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 2
tae00270 Cysteine and methionine metabolism 2
tae00566 Sulfoquinovose metabolism 2
tae00620 Pyruvate metabolism 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 3
tae00270 Cysteine and methionine metabolism 3
tae00566 Sulfoquinovose metabolism 3
tae00620 Pyruvate metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102617495 831314 103847420 107898500 106450521 106372606 125579114 100782577 100778158 100260201 18100243 25484058 101260755 102606419 107786355 107791525 4332468 100273699 123097819 123092505 123085530 123448950 8084884 100839132 5727367
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