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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102618543   ATP-dependent DNA helicase Q-like 5 
 ath-u.5   AT1G27880   DEAD/DEAH box RNA helicase family protein 
 bra-r.6   103829042   ATP-dependent DNA helicase Q-like 5 
 ghi-r.1   107916626   ATP-dependent DNA helicase Q-like 5 
 ghi-r.1   107922502   ATP-dependent DNA helicase Q-like 5 
 bna-r.1   106358041   ATP-dependent DNA helicase Q-like 5 
 bna-r.1   106389646   ATP-dependent DNA helicase Q-like 5 
 gma-u.5   100811214   ATP-dependent DNA helicase Q-like 5 
 vvi-u.5   100256355   ATP-dependent DNA helicase Q-like 5 
 mtr-u.5   25501716   ATP-dependent DNA helicase Q-like 5 
 sly-u.5   101256877   ATP-dependent DNA helicase Q-like 5 
 sot-r.1   102585773   ATP-dependent DNA helicase Q-like 5 
 nta-r.1   107760761   ATP-dependent DNA helicase Q-like 5 
 nta-r.1   107819977   ATP-dependent DNA helicase Q-like 5 
 osa-u.5   4336217   ATP-dependent DNA helicase Q-like 5 
 zma-u.5   103641779   ATP-dependent DNA helicase Q-like 5 
 tae-r.2   123189580   ATP-dependent DNA helicase Q-like 5 
 tae-r.2   123053705   ATP-dependent DNA helicase Q-like 5 
 hvu-r.1   123427058   ATP-dependent DNA helicase Q-like 5 
 sbi-r.1   8060169   ATP-dependent DNA helicase Q-like 5 
 bdi-r.1   100842721   ATP-dependent DNA helicase Q-like 5 

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Top 50 coexpressed genes to 102618543 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102618543 (cit-r.1 coexpression data)

CoexMap"102618543"


citLOC102618543 | Entrez gene ID : 102618543    
Species cit ath bra ghi bna gma vvi mtr sly sot nta osa zma tae hvu sbi bdi ppo cre
Paralog 1 1 1 2 2 1 1 1 1 1 2 1 1 2 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (65 genes)  IEA  
GO CC
GO:0005694 [list] [network] chromosome  (273 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4272 genes)  IEA  
GO MF
GO:0009378 [list] [network] four-way junction helicase activity  (8 genes)  IEA  
GO:0043138 [list] [network] 3'-5' DNA helicase activity  (13 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1864 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3051 genes)  IEA  
Protein XP_052296297.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_052296297.1)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for XP_052296297.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102618543
ath-u.5
for
AT1G27880
bra-r.6
for
103829042
ghi-r.1
for
107916626
ghi-r.1
for
107922502
bna-r.1
for
106358041
bna-r.1
for
106389646
gma-u.5
for
100811214
vvi-u.5
for
100256355
mtr-u.5
for
25501716
sly-u.5
for
101256877
sot-r.1
for
102585773
nta-r.1
for
107760761
nta-r.1
for
107819977
osa-u.5
for
4336217
zma-u.5
for
103641779
tae-r.2
for
123189580
tae-r.2
for
123053705
hvu-r.1
for
123427058
sbi-r.1
for
8060169
bdi-r.1
for
100842721


Ortholog ID: 11487
Species cit ath bra ghi ghi bna bna gma vvi mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC102618543 AT1G27880 LOC103829042 LOC107916626 LOC107922502 LOC106358041 LOC106389646 LOC100811214 LOC100256355 LOC25501716 LOC101256877 LOC102585773 LOC107760761 LOC107819977 LOC4336217 LOC103641779 LOC123189580 LOC123053705 LOC123427058 LOC8060169 LOC100842721
Function* ATP-dependent DNA helicase Q-like 5 DEAD/DEAH box RNA helicase family protein ATP-dependent DNA helicase Q-like 5 ATP-dependent DNA helicase Q-like 5 ATP-dependent DNA helicase Q-like 5 ATP-dependent DNA helicase Q-like 5 ATP-dependent DNA helicase Q-like 5 ATP-dependent DNA helicase Q-like 5 ATP-dependent DNA helicase Q-like 5 ATP-dependent DNA helicase Q-like 5 ATP-dependent DNA helicase Q-like 5 ATP-dependent DNA helicase Q-like 5 ATP-dependent DNA helicase Q-like 5 ATP-dependent DNA helicase Q-like 5 ATP-dependent DNA helicase Q-like 5 ATP-dependent DNA helicase Q-like 5 ATP-dependent DNA helicase Q-like 5 ATP-dependent DNA helicase Q-like 5 ATP-dependent DNA helicase Q-like 5 ATP-dependent DNA helicase Q-like 5 ATP-dependent DNA helicase Q-like 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 4
ath03030 DNA replication 4
ath03460 Fanconi anemia pathway 3
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 7
bra03410 Base excision repair 3
bra03420 Nucleotide excision repair 3
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 4
ghi00190 Oxidative phosphorylation 4
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 6
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 9
bna03430 Mismatch repair 4
bna03440 Homologous recombination 3
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 9
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 11
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 4
vvi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 6
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 10
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03430 Mismatch repair 2
nta00270 Cysteine and methionine metabolism 2
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 4
osa01232 Nucleotide metabolism 4
osa00230 Purine metabolism 3
osa00480 Glutathione metabolism 3
osa03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 7
zma03440 Homologous recombination 3
zma03420 Nucleotide excision repair 2
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 10
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 10
tae03420 Nucleotide excision repair 4
tae03430 Mismatch repair 4
tae03440 Homologous recombination 4
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03440 Homologous recombination 3
sbi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102618543 839681 103829042 107916626 107922502 106358041 106389646 100811214 100256355 25501716 101256877 102585773 107760761 107819977 4336217 103641779 123189580 123053705 123427058 8060169 100842721
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