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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102619228   crossover junction endonuclease MUS81 
 ath-u.5   MUS81   Restriction endonuclease, type II-like superfamily protein 
 bra-r.6   103839872   crossover junction endonuclease MUS81 
 ghi-r.1   107933257   crossover junction endonuclease MUS81 
 ghi-r.1   107918625   crossover junction endonuclease MUS81 
 bna-r.1   106381584   crossover junction endonuclease MUS81 
 bna-r.1   106366117   crossover junction endonuclease MUS81 
 gma-u.5   100798497   crossover junction endonuclease MUS81 
 vvi-u.5   100265347   crossover junction endonuclease MUS81 
 ppo-u.5   7462772   crossover junction endonuclease MUS81 
 mtr-u.5   11417347   crossover junction endonuclease MUS81 
 sly-u.5   101256033   crossover junction endonuclease MUS81 
 sot-r.1   102588124   crossover junction endonuclease MUS81 
 nta-r.1   107791766   crossover junction endonuclease MUS81 
 nta-r.1   107830439   crossover junction endonuclease MUS81-like 
 osa-u.5   4325837   crossover junction endonuclease MUS81-like 
 zma-u.5   100216934   crossover junction endonuclease MUS81 
 zma-u.5   103650756   crossover junction endonuclease MUS81 
 tae-r.2   123063448   crossover junction endonuclease MUS81 
 tae-r.2   123063450   crossover junction endonuclease MUS81 
 tae-r.2   123069693   crossover junction endonuclease MUS81 
 hvu-r.1   123443520   crossover junction endonuclease MUS81-like 
 hvu-r.1   123445478   crossover junction endonuclease MUS81-like 
 sbi-r.1   110433489   crossover junction endonuclease MUS81-like 
 sbi-r.1   8081327   crossover junction endonuclease MUS81 
 bdi-r.1   100844668   crossover junction endonuclease MUS81 
 bdi-r.1   100833052   crossover junction endonuclease MUS81 
 bdi-r.1   100829380   crossover junction endonuclease MUS81 
 cre-r.1   CHLRE_12g555050v5   uncharacterized protein 

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Top 50 coexpressed genes to 102619228 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102619228 (cit-r.1 coexpression data)

CoexMap"102619228"


citLOC102619228 | Entrez gene ID : 102619228    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 1 2 2 1 1 1 1 1 1 2 1 2 3 2 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit03440 [list] [network] Homologous recombination (45 genes)
cit03460 [list] [network] Fanconi anemia pathway (39 genes)
GO BP
GO:0006308 [list] [network] DNA catabolic process  (6 genes)  IEA  
GO:0000712 [list] [network] resolution of meiotic recombination intermediates  (8 genes)  IEA  
GO:0031573 [list] [network] mitotic intra-S DNA damage checkpoint signaling  (8 genes)  IEA  
GO:0000727 [list] [network] double-strand break repair via break-induced replication  (10 genes)  IEA  
GO CC
GO:0048476 [list] [network] Holliday junction resolvase complex  (2 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO MF
GO:0048257 [list] [network] 3'-flap endonuclease activity  (1 genes)  IEA  
GO:0008821 [list] [network] crossover junction DNA endonuclease activity  (5 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1476 genes)  IEA  
Protein XP_006482972.1 [sequence] [blastp]
XP_006482973.1 [sequence] [blastp]
XP_052295947.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cyto 1  (predict for XP_006482972.1)
nucl 9  (predict for XP_006482973.1)
nucl 7,  cyto 2  (predict for XP_052295947.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006482972.1)
other 8  (predict for XP_006482973.1)
other 8  (predict for XP_052295947.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102619228
ath-u.5
for
MUS81
bra-r.6
for
103839872
ghi-r.1
for
107933257
ghi-r.1
for
107918625
bna-r.1
for
106381584
bna-r.1
for
106366117
gma-u.5
for
100798497
vvi-u.5
for
100265347
ppo-u.5
for
7462772
mtr-u.5
for
11417347
sly-u.5
for
101256033
sot-r.1
for
102588124
nta-r.1
for
107791766
nta-r.1
for
107830439
osa-u.5
for
4325837
zma-u.5
for
100216934
zma-u.5
for
103650756
tae-r.2
for
123063448
tae-r.2
for
123063450
tae-r.2
for
123069693
hvu-r.1
for
123443520
hvu-r.1
for
123445478
sbi-r.1
for
110433489
sbi-r.1
for
8081327
bdi-r.1
for
100844668
bdi-r.1
for
100833052
bdi-r.1
for
100829380
cre-r.1
for
CHLRE_12g555050v5


Ortholog ID: 5561
Species cit ath bra ghi ghi bna bna gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi bdi cre
Symbol LOC102619228 MUS81 LOC103839872 LOC107933257 LOC107918625 LOC106381584 LOC106366117 LOC100798497 LOC100265347 LOC7462772 LOC11417347 LOC101256033 LOC102588124 LOC107791766 LOC107830439 LOC4325837 LOC100216934 LOC103650756 LOC123061103 LOC123078178 LOC123113047 LOC123443520 LOC123445478 LOC110433489 LOC8081327 LOC100844668 LOC100833052 LOC100829380 CHLRE_12g555050v5
Function* crossover junction endonuclease MUS81 Restriction endonuclease, type II-like superfamily protein crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81-like crossover junction endonuclease MUS81-like crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81-like crossover junction endonuclease MUS81-like crossover junction endonuclease MUS81-like crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 crossover junction endonuclease MUS81 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 3
ath03460 Fanconi anemia pathway 2
ath04120 Ubiquitin mediated proteolysis 2
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03440 Homologous recombination 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 4
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 4
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04517 IgSF CAM signaling 2
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04517 IgSF CAM signaling 2
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03460 Fanconi anemia pathway 4
gma03440 Homologous recombination 3
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 3
vvi03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03440 Homologous recombination 4
ppo03460 Fanconi anemia pathway 3
ppo03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03440 Homologous recombination 3
mtr03460 Fanconi anemia pathway 3
mtr03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 3
sly04814 Motor proteins 2
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
sot00240 Pyrimidine metabolism 2
sot00480 Glutathione metabolism 2
sot01232 Nucleotide metabolism 2
sot03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 4
osa03460 Fanconi anemia pathway 3
osa03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03440 Homologous recombination 3
zma03460 Fanconi anemia pathway 3
zma03030 DNA replication 2
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 3
zma03440 Homologous recombination 2
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae04814 Motor proteins 3
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03440 Homologous recombination 2
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03440 Homologous recombination 3
bdi03460 Fanconi anemia pathway 3
bdi01230 Biosynthesis of amino acids 2
bdi00190 Oxidative phosphorylation 2
bdi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102619228 829211 103839872 107933257 107918625 106381584 106366117 100798497 100265347 7462772 11417347 101256033 102588124 107791766 107830439 4325837 100216934 103650756 123061103 123078178 123113047 123443520 123445478 110433489 8081327 100844668 100833052 100829380 5719728
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