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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102619392   THO complex subunit 6 
 ath-u.5   DWA1   DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 
 bra-r.6   103828298   THO complex subunit 6 
 ghi-r.1   107899953   THO complex subunit 6 
 ghi-r.1   107895807   THO complex subunit 6 
 bna-r.1   106352952   THO complex subunit 6 
 bna-r.1   106390005   THO complex subunit 6-like 
 gma-u.5   100820024   WD40 domain-containing protin 
 gma-u.5   100806423   THO complex subunit 6 
 vvi-u.5   100244028   uncharacterized LOC100244028 
 ppo-u.5   18101254   THO complex subunit 6 
 sly-u.5   101264535   THO complex subunit 6 
 sot-r.1   102594146   THO complex subunit 6 
 nta-r.1   107787142   eukaryotic initiation factor 4A-9 
 nta-r.1   107777567   THO complex subunit 6 
 osa-u.5   4346861   THO complex subunit 6 
 zma-u.5   103632647   THO complex subunit 6 
 tae-r.2   123121357   THO complex subunit 6 
 tae-r.2   123111793   THO complex subunit 6 
 tae-r.2   123103569   THO complex subunit 6 
 hvu-r.1   123395025   THO complex subunit 6 
 sbi-r.1   8055579   THO complex subunit 6 
 bdi-r.1   100825336   THO complex subunit 6 
 cre-r.1   CHLRE_03g180200v5   uncharacterized protein 

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Top 50 coexpressed genes to 102619392 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102619392 (cit-r.1 coexpression data)

CoexMap"102619392"


citLOC102619392 | Entrez gene ID : 102619392    
Species cit ath bra ghi bna gma vvi ppo sly sot nta osa zma tae hvu sbi bdi cre mtr
Paralog 1 1 1 2 2 2 1 1 1 1 2 1 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit03013 [list] [network] Nucleocytoplasmic transport (96 genes)
cit03040 [list] [network] Spliceosome (220 genes)
GO BP
GO:0006406 [list] [network] mRNA export from nucleus  (28 genes)  IEA  
GO CC
GO:0000346 [list] [network] transcription export complex  (6 genes)  IEA  
GO:0000347 [list] [network] THO complex  (6 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006475487.1 [sequence] [blastp]
XP_052291709.1 [sequence] [blastp]
XP_052291715.1 [sequence] [blastp]
XP_052291720.1 [sequence] [blastp]
XP_052291723.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1,  pero 1  (predict for XP_006475487.1)
cyto 6,  nucl 3  (predict for XP_052291709.1)
cyto 6,  nucl 2,  chlo 1  (predict for XP_052291715.1)
cyto 6,  nucl 2,  chlo 1,  extr 1,  pero 1  (predict for XP_052291720.1)
cyto 4,  nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_052291723.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006475487.1)
other 8  (predict for XP_052291709.1)
other 8  (predict for XP_052291715.1)
other 8  (predict for XP_052291720.1)
other 8  (predict for XP_052291723.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102619392
ath-u.5
for
DWA1
bra-r.6
for
103828298
ghi-r.1
for
107899953
ghi-r.1
for
107895807
bna-r.1
for
106352952
bna-r.1
for
106390005
gma-u.5
for
100820024
gma-u.5
for
100806423
vvi-u.5
for
100244028
ppo-u.5
for
18101254
sly-u.5
for
101264535
sot-r.1
for
102594146
nta-r.1
for
107787142
nta-r.1
for
107777567
osa-u.5
for
4346861
zma-u.5
for
103632647
tae-r.2
for
123121357
tae-r.2
for
123111793
tae-r.2
for
123103569
hvu-r.1
for
123395025
sbi-r.1
for
8055579
bdi-r.1
for
100825336
cre-r.1
for
CHLRE_03g180200v5


Ortholog ID: 10661
Species cit ath bra ghi ghi bna bna gma gma vvi ppo sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102619392 DWA1 LOC103828298 LOC107899953 LOC107895807 LOC106352952 LOC106390005 LOC100820024 LOC100806423 LOC100244028 LOC18101254 LOC101264535 LOC102594146 LOC107787142 LOC107777567 LOC4346861 LOC103632647 LOC123121357 LOC123111793 LOC123103569 LOC123395025 LOC8055579 LOC100825336 CHLRE_03g180200v5
Function* THO complex subunit 6 DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6-like WD40 domain-containing protin THO complex subunit 6 uncharacterized LOC100244028 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 eukaryotic initiation factor 4A-9 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 THO complex subunit 6 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 4
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna03083 Polycomb repressive complex 4
bna03013 Nucleocytoplasmic transport 3
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
bna03083 Polycomb repressive complex 6
bna03013 Nucleocytoplasmic transport 3
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 5
gma00513 Various types of N-glycan biosynthesis 5
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03013 Nucleocytoplasmic transport 3
gma03015 mRNA surveillance pathway 3
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04148 Efferocytosis 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
sot03013 Nucleocytoplasmic transport 2
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
osa03010 Ribosome 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03040 Spliceosome 7
tae03015 mRNA surveillance pathway 4
tae04122 Sulfur relay system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03040 Spliceosome 7
tae03015 mRNA surveillance pathway 4
tae04122 Sulfur relay system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 9
tae03040 Spliceosome 9
tae03015 mRNA surveillance pathway 6
tae00040 Pentose and glucuronate interconversions 2
tae00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03018 RNA degradation 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102619392 816462 103828298 107899953 107895807 106352952 106390005 100820024 100806423 100244028 18101254 101264535 102594146 107787142 107777567 4346861 103632647 123121357 123111793 123103569 123395025 8055579 100825336 5728790
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