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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102619574   probable RNA helicase SDE3 
 cit-r.1   102615655   probable RNA helicase SDE3 
 ath-u.5   SDE3   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 bra-r.6   103844125   probable RNA helicase SDE3 
 ghi-r.1   107945958   probable RNA helicase SDE3 
 ghi-r.1   107929176   probable RNA helicase SDE3 
 ghi-r.1   107928604   probable RNA helicase SDE3 
 bna-r.1   106371189   probable RNA helicase SDE3 
 bna-r.1   111197903   probable RNA helicase SDE3 
 gma-u.5   100801796   probable RNA helicase SDE3 
 vvi-u.5   100247679   probable RNA helicase SDE3 
 ppo-u.5   18101568   probable RNA helicase SDE3 
 ppo-u.5   18098912   probable RNA helicase SDE3 
 mtr-u.5   11441457   probable RNA helicase SDE3 
 mtr-u.5   11416205   probable RNA helicase SDE3 
 sly-u.5   101258662   probable RNA helicase SDE3 
 sly-u.5   101251686   probable RNA helicase SDE3 
 sot-r.1   102582644   probable RNA helicase SDE3 
 nta-r.1   107821118   putative RNA helicase SDE3 
 nta-r.1   107787108   putative RNA helicase SDE3 
 osa-u.5   4331698   probable RNA helicase SDE3 
 zma-u.5   100382450   putative RNA helicase family protein 
 zma-u.5   103631746   probable RNA helicase SDE3 
 tae-r.2   123093229   probable RNA helicase SDE3 
 tae-r.2   123084864   probable RNA helicase SDE3 
 tae-r.2   123098491   probable RNA helicase SDE3 
 hvu-r.1   123449501   probable RNA helicase SDE3 
 sbi-r.1   8082158   probable RNA helicase SDE3 
 bdi-r.1   100840158   probable RNA helicase SDE3 
 cre-r.1   CHLRE_12g542450v5   uncharacterized protein 

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Top 50 coexpressed genes to 102619574 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102619574 (cit-r.1 coexpression data)

CoexMap"102619574"


citLOC102619574 | Entrez gene ID : 102619574    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 3 2 1 1 2 2 2 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0032574 [list] [network] 5'-3' RNA helicase activity  (2 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
Protein XP_006471775.2 [sequence] [blastp]
XP_015383901.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  chlo 1,  extr 1,  vacu 1  (predict for XP_006471775.2)
cyto 4,  nucl 4,  chlo 1,  extr 1,  vacu 1  (predict for XP_015383901.2)
Subcellular
localization
TargetP
other 9  (predict for XP_006471775.2)
other 9  (predict for XP_015383901.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102619574
cit-r.1
for
102615655
ath-u.5
for
SDE3
bra-r.6
for
103844125
ghi-r.1
for
107945958
ghi-r.1
for
107929176
ghi-r.1
for
107928604
bna-r.1
for
106371189
bna-r.1
for
111197903
gma-u.5
for
100801796
vvi-u.5
for
100247679
ppo-u.5
for
18101568
ppo-u.5
for
18098912
mtr-u.5
for
11441457
mtr-u.5
for
11416205
sly-u.5
for
101258662
sly-u.5
for
101251686
sot-r.1
for
102582644
nta-r.1
for
107821118
nta-r.1
for
107787108
osa-u.5
for
4331698
zma-u.5
for
100382450
zma-u.5
for
103631746
tae-r.2
for
123093229
tae-r.2
for
123084864
tae-r.2
for
123098491
hvu-r.1
for
123449501
sbi-r.1
for
8082158
bdi-r.1
for
100840158
cre-r.1
for
CHLRE_12g542450v5


Ortholog ID: 7397
Species cit cit ath bra ghi ghi ghi bna bna gma vvi ppo ppo mtr mtr sly sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC102619574 LOC102615655 SDE3 LOC103844125 LOC107929176 LOC107928604 LOC107888690 LOC106371189 LOC111197903 LOC100801796 LOC100247679 LOC18101568 LOC18098912 LOC11441457 LOC11416205 LOC101258662 LOC101251686 LOC102582644 LOC107821118 LOC107787108 LOC4331698 LOC100382450 LOC103631746 LOC123093229 LOC123084864 LOC123098491 LOC123449501 LOC8082158 LOC100840158 CHLRE_12g542450v5
Function* probable RNA helicase SDE3 probable RNA helicase SDE3 P-loop containing nucleoside triphosphate hydrolases superfamily protein probable RNA helicase SDE3 probable RNA helicase SDE3 probable RNA helicase SDE3 probable RNA helicase SDE3 probable RNA helicase SDE3 probable RNA helicase SDE3 probable RNA helicase SDE3 probable RNA helicase SDE3 probable RNA helicase SDE3 probable RNA helicase SDE3 probable RNA helicase SDE3 probable RNA helicase SDE3 probable RNA helicase SDE3 probable RNA helicase SDE3 probable RNA helicase SDE3 putative RNA helicase SDE3 putative RNA helicase SDE3 probable RNA helicase SDE3 putative RNA helicase family protein probable RNA helicase SDE3 probable RNA helicase SDE3 probable RNA helicase SDE3 probable RNA helicase SDE3 probable RNA helicase SDE3 probable RNA helicase SDE3 probable RNA helicase SDE3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 4
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 4
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
gma00670 One carbon pool by folate 3
gma00240 Pyrimidine metabolism 2
gma00790 Folate biosynthesis 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 3
mtr00290 Valine, leucine and isoleucine biosynthesis 2
mtr00650 Butanoate metabolism 2
mtr00660 C5-Branched dibasic acid metabolism 2
mtr00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 2
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04814 Motor proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00590 Arachidonic acid metabolism 2
nta00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 4
hvu03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03420 Nucleotide excision repair 3
sbi03040 Spliceosome 3
sbi03030 DNA replication 2
sbi03410 Base excision repair 2
sbi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
bdi00100 Steroid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102619574 102615655 837047 103844125 107929176 107928604 107888690 106371189 111197903 100801796 100247679 18101568 18098912 11441457 11416205 101258662 101251686 102582644 107821118 107787108 4331698 100382450 103631746 123093229 123084864 123098491 123449501 8082158 100840158 66055727
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