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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102619966   serine--tRNA ligase, chloroplastic/mitochondrial 
 ath-u.5   SRS   Seryl-tRNA synthetase 
 gma-u.5   100809150   serine--tRNA ligase, chloroplastic/mitochondrial 
 vvi-u.5   100261676   serine--tRNA ligase, chloroplastic/mitochondrial 
 ppo-u.5   7461791   serine--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   11434218   serine--tRNA ligase, chloroplastic/mitochondrial 
 sly-u.5   101263605   serine--tRNA ligase, chloroplastic/mitochondrial 
 osa-u.5   4350906   serine--tRNA ligase, chloroplastic/mitochondrial 
 zma-u.5   542538   seryl-tRNA synthetase 

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Top 50 coexpressed genes to 102619966 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102619966 (cit-r.1 coexpression data)

CoexMap"102619966"


citLOC102619966 | Entrez gene ID : 102619966    
Species cit ath gma vvi ppo mtr sly osa zma hvu bna bra ghi sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit00970 [list] [network] Aminoacyl-tRNA biosynthesis (466 genes)
GO BP
GO:0070158 [list] [network] mitochondrial seryl-tRNA aminoacylation  (1 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (512 genes)  IEA  
GO MF
GO:0004828 [list] [network] serine-tRNA ligase activity  (2 genes)  IEA  
GO:0000049 [list] [network] tRNA binding  (24 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1864 genes)  IEA  
Protein XP_052298509.1 [sequence] [blastp]
XP_052298510.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  extr 1,  cyto_nucl 1  (predict for XP_052298509.1)
chlo 10  (predict for XP_052298510.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_052298509.1)
chlo 8  (predict for XP_052298510.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102619966
ath-u.5
for
SRS
gma-u.5
for
100809150
vvi-u.5
for
100261676
ppo-u.5
for
7461791
mtr-u.5
for
11434218
sly-u.5
for
101263605
osa-u.5
for
4350906
zma-u.5
for
542538


Ortholog ID: 9209
Species cit ath bra bra ghi ghi bna bna gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC102619966 SRS LOC103836202 LOC103843218 LOC107957780 LOC107905087 LOC106413865 LOC106362173 LOC100809150 LOC100261676 LOC7461791 LOC11434218 LOC101263605 LOC102585223 LOC107821468 LOC107795196 LOC4350906 LOC542538 LOC123120461 LOC123111263 LOC123448544 LOC8074400 LOC100838732 CHLRE_02g082877v5
Function* serine--tRNA ligase, chloroplastic/mitochondrial Seryl-tRNA synthetase serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial-like serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial seryl-tRNA synthetase serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 6
bra01230 Biosynthesis of amino acids 3
bra00270 Cysteine and methionine metabolism 2
bra00300 Lysine biosynthesis 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00750 Vitamin B6 metabolism 2
ghi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
gma00566 Sulfoquinovose metabolism 2
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00030 Pentose phosphate pathway 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 3
sly00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 7
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 5
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 10
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03060 Protein export 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 4
bdi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102619966 837734 103836202 103843218 107957780 107905087 106413865 106362173 100809150 100261676 7461791 11434218 101263605 102585223 107821468 107795196 4350906 542538 123120461 123111263 123448544 8074400 100838732 5727332
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