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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102625552   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 ath-u.5   Pnsl5   cyclophilin 20-2 
 bra-r.6   103856001   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 ghi-r.1   107933119   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 ghi-r.1   107905244   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 bna-r.1   106454776   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 bna-r.1   125593377   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 gma-u.5   CYP23   peptidyl-prolyl cis-trans isomerase CYP23 
 gma-u.5   CYP10   peptidyl-prolyl cis-trans isomerase CYP10 
 vvi-u.5   100248997   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 ppo-u.5   7482801   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 ppo-u.5   7496556   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 mtr-u.5   25485759   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 sly-u.5   101263049   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 sot-r.1   102602349   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 nta-r.1   107802154   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 nta-r.1   107779077   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 osa-u.5   4337539   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 zma-u.5   103629299   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 zma-u.5   100282887   peptidyl-prolyl cis-trans isomerase 
 tae-r.2   123179793   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 tae-r.2   123102956   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 tae-r.2   123184521   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 hvu-r.1   123397780   photosynthetic NDH subunit of lumenal location 5, chloroplastic-like 
 sbi-r.1   8065277   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 bdi-r.1   100840120   photosynthetic NDH subunit of lumenal location 5, chloroplastic 
 cre-r.1   CHLRE_12g495951v5   uncharacterized protein 

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Top 50 coexpressed genes to 102625552 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102625552 (cit-r.1 coexpression data)

CoexMap"102625552"


citLOC102625552 | Entrez gene ID : 102625552      
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 1 2 2 2 1 2 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000413 [list] [network] protein peptidyl-prolyl isomerization  (28 genes)  IEA  
GO:0006457 [list] [network] protein folding  (194 genes)  IEA  
GO CC
GO MF
GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity  (53 genes)  IEA  
Protein XP_006484168.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_006484168.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006484168.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102625552
ath-u.5
for
Pnsl5
bra-r.6
for
103856001
ghi-r.1
for
107933119
ghi-r.1
for
107905244
bna-r.1
for
106454776
bna-r.1
for
125593377
gma-u.5
for
CYP23
gma-u.5
for
CYP10
vvi-u.5
for
100248997
ppo-u.5
for
7482801
ppo-u.5
for
7496556
mtr-u.5
for
25485759
sly-u.5
for
101263049
sot-r.1
for
102602349
nta-r.1
for
107802154
nta-r.1
for
107779077
osa-u.5
for
4337539
zma-u.5
for
103629299
zma-u.5
for
100282887
tae-r.2
for
123179793
tae-r.2
for
123102956
tae-r.2
for
123184521
hvu-r.1
for
123397780
sbi-r.1
for
8065277
bdi-r.1
for
100840120
cre-r.1
for
CHLRE_12g495951v5


Ortholog ID: 9091
Species cit ath bra ghi ghi bna bna gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC102625552 Pnsl5 LOC103856001 LOC107933119 LOC107905244 LOC106454776 LOC125593377 CYP23 CYP10 LOC100248997 LOC7482801 LOC7496556 LOC25485759 LOC101263049 LOC102602349 LOC107802154 LOC107779077 LOC4337539 LOC103629299 LOC100282887 LOC123179793 LOC123102956 LOC123184521 LOC123397780 LOC8065277 LOC100840120 CHLRE_12g495951v5
Function* photosynthetic NDH subunit of lumenal location 5, chloroplastic cyclophilin 20-2 photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic peptidyl-prolyl cis-trans isomerase CYP23 peptidyl-prolyl cis-trans isomerase CYP10 photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic peptidyl-prolyl cis-trans isomerase photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic-like photosynthetic NDH subunit of lumenal location 5, chloroplastic photosynthetic NDH subunit of lumenal location 5, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
ath00010 Glycolysis / Gluconeogenesis 2
ath00562 Inositol phosphate metabolism 2
ath00710 Carbon fixation by Calvin cycle 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
bra01230 Biosynthesis of amino acids 5
bra01200 Carbon metabolism 4
bra00010 Glycolysis / Gluconeogenesis 3
bra00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi00670 One carbon pool by folate 3
ghi00785 Lipoic acid metabolism 3
ghi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi00670 One carbon pool by folate 3
ghi00785 Lipoic acid metabolism 3
ghi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 5
bna00010 Glycolysis / Gluconeogenesis 4
bna00051 Fructose and mannose metabolism 4
bna00710 Carbon fixation by Calvin cycle 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
gma01200 Carbon metabolism 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03018 RNA degradation 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00010 Glycolysis / Gluconeogenesis 5
vvi00620 Pyruvate metabolism 5
vvi01200 Carbon metabolism 5
vvi01240 Biosynthesis of cofactors 3
vvi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 2
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 5
sot00860 Porphyrin metabolism 3
sot00061 Fatty acid biosynthesis 2
sot01212 Fatty acid metabolism 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
nta01240 Biosynthesis of cofactors 4
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
nta01240 Biosynthesis of cofactors 4
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 4
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
zma03010 Ribosome 3
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma01230 Biosynthesis of amino acids 4
zma00290 Valine, leucine and isoleucine biosynthesis 3
zma00660 C5-Branched dibasic acid metabolism 3
zma01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 2
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 5
hvu00860 Porphyrin metabolism 4
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00350 Tyrosine metabolism 3
sbi00360 Phenylalanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 6
bdi03010 Ribosome 3
bdi00860 Porphyrin metabolism 3
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 4
cre00230 Purine metabolism 2
cre00240 Pyrimidine metabolism 2
cre01232 Nucleotide metabolism 2
cre04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102625552 831151 103856001 107933119 107905244 106454776 125593377 100796688 100777088 100248997 7482801 7496556 25485759 101263049 102602349 107802154 107779077 4337539 103629299 100282887 123179793 123102956 123184521 123397780 8065277 100840120 5726097
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