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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102625820   pentatricopeptide repeat-containing protein At3g09650, chloroplastic 
 ath-u.5   HCF152   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100808587   pentatricopeptide repeat-containing protein At3g09650, chloroplastic 
 vvi-u.5   100248209   pentatricopeptide repeat-containing protein At3g09650, chloroplastic 
 ppo-u.5   7465297   pentatricopeptide repeat-containing protein At3g09650, chloroplastic 
 mtr-u.5   25484046   pentatricopeptide repeat-containing protein At3g09650, chloroplastic 
 sly-u.5   104649090   pentatricopeptide repeat-containing protein At3g09650, chloroplastic 
 osa-u.5   4349537   pentatricopeptide repeat-containing protein At3g09650, chloroplastic 
 osa-u.5   4351246   pentatricopeptide repeat-containing protein At3g09650, chloroplastic 
 zma-u.5   103651307   pentatricopeptide repeat-containing protein At3g09650, chloroplastic 

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Top 50 coexpressed genes to 102625820 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102625820 (cit-r.1 coexpression data)

CoexMap"102625820"


citLOC102625820 | Entrez gene ID : 102625820    
Species cit ath gma vvi ppo mtr sly osa zma bdi hvu bra bna sbi ghi sot nta cre tae
Paralog 1 1 1 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_024955732.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1,  plas 1,  pero 1,  mito_plas 1  (predict for XP_024955732.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_024955732.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102625820
ath-u.5
for
HCF152
gma-u.5
for
100808587
vvi-u.5
for
100248209
ppo-u.5
for
7465297
mtr-u.5
for
25484046
sly-u.5
for
104649090
osa-u.5
for
4349537
osa-u.5
for
4351246
zma-u.5
for
103651307


Ortholog ID: 10747
Species cit ath bra ghi bna bna gma vvi ppo mtr sly sot nta nta osa osa zma tae tae hvu sbi bdi cre
Symbol LOC102625820 HCF152 LOC103870526 LOC107940142 LOC106452759 LOC111215775 LOC100808587 LOC100248209 LOC7465297 LOC25484046 LOC104649090 LOC102581364 LOC107821954 LOC107785212 LOC4351246 LOC4349537 LOC103651307 LOC123103244 LOC123120548 LOC123395927 LOC8063101 LOC100828935 CHLRE_01g050500v5
Function* pentatricopeptide repeat-containing protein At3g09650, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g09650, chloroplastic pentatricopeptide repeat-containing protein At3g09650, chloroplastic pentatricopeptide repeat-containing protein At3g09650, chloroplastic pentatricopeptide repeat-containing protein At3g09650, chloroplastic pentatricopeptide repeat-containing protein At3g09650, chloroplastic pentatricopeptide repeat-containing protein At3g09650, chloroplastic pentatricopeptide repeat-containing protein At3g09650, chloroplastic pentatricopeptide repeat-containing protein At3g09650, chloroplastic pentatricopeptide repeat-containing protein At3g09650, chloroplastic pentatricopeptide repeat-containing protein At3g09650, chloroplastic pentatricopeptide repeat-containing protein At3g09650, chloroplastic-like pentatricopeptide repeat-containing protein At3g09650, chloroplastic-like pentatricopeptide repeat-containing protein At3g09650, chloroplastic pentatricopeptide repeat-containing protein At3g09650, chloroplastic pentatricopeptide repeat-containing protein At3g09650, chloroplastic pentatricopeptide repeat-containing protein At3g09650, chloroplastic pentatricopeptide repeat-containing protein At3g09650, chloroplastic pentatricopeptide repeat-containing protein At3g09650, chloroplastic pentatricopeptide repeat-containing protein At3g09650, chloroplastic pentatricopeptide repeat-containing protein At3g09650, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
ghi01240 Biosynthesis of cofactors 4
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 4
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00750 Vitamin B6 metabolism 2
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102625820 820122 103870526 107940142 106452759 111215775 100808587 100248209 7465297 25484046 104649090 102581364 107821954 107785212 4351246 4349537 103651307 123103244 123120548 123395927 8063101 100828935 5715738
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