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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102628860   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 ath-u.5   EMB1865   CRS1 / YhbY (CRM) domain-containing protein 
 bra-r.6   103838086   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 bra-r.6   103859751   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 ghi-r.1   107931019   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 ghi-r.1   121211241   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 bna-r.1   106360914   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 bna-r.1   106347029   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 bna-r.1   106439556   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 gma-u.5   100808013   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 gma-u.5   100788177   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 gma-u.5   100776626   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 vvi-u.5   104882345   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 ppo-u.5   7487071   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 mtr-u.5   11437175   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 mtr-u.5   11408111   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 sly-u.5   101266406   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 sot-r.1   102593632   chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic 
 nta-r.1   107800404   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 nta-r.1   107821642   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 osa-u.5   4339536   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 zma-u.5   103630698   CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like 
 tae-r.2   123066701   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 tae-r.2   123182945   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 tae-r.2   123144075   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 hvu-r.1   123449348   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 sbi-r.1   110430268   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 bdi-r.1   100846803   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 

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Top 50 coexpressed genes to 102628860 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102628860 (cit-r.1 coexpression data)

CoexMap"102628860"


citLOC102628860 | Entrez gene ID : 102628860    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 2 2 3 3 1 1 2 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000375 [list] [network] RNA splicing, via transesterification reactions  (168 genes)  IEA  
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (227 genes)  IEA  
Protein XP_006485796.2 [sequence] [blastp]
XP_024956358.2 [sequence] [blastp]
XP_052292851.1 [sequence] [blastp]
XP_052292852.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_006485796.2)
chlo 9  (predict for XP_024956358.2)
chlo 9  (predict for XP_052292851.1)
chlo 9,  cyto 1  (predict for XP_052292852.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006485796.2)
chlo 9  (predict for XP_024956358.2)
chlo 9  (predict for XP_052292851.1)
mito 9  (predict for XP_052292852.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102628860
ath-u.5
for
EMB1865
bra-r.6
for
103838086
bra-r.6
for
103859751
ghi-r.1
for
107931019
ghi-r.1
for
121211241
bna-r.1
for
106360914
bna-r.1
for
106347029
bna-r.1
for
106439556
gma-u.5
for
100808013
gma-u.5
for
100788177
gma-u.5
for
100776626
vvi-u.5
for
104882345
ppo-u.5
for
7487071
mtr-u.5
for
11437175
mtr-u.5
for
11408111
sly-u.5
for
101266406
sot-r.1
for
102593632
nta-r.1
for
107800404
nta-r.1
for
107821642
osa-u.5
for
4339536
zma-u.5
for
103630698
tae-r.2
for
123066701
tae-r.2
for
123182945
tae-r.2
for
123144075
hvu-r.1
for
123449348
sbi-r.1
for
110430268
bdi-r.1
for
100846803


Ortholog ID: 8018
Species cit ath bra bra ghi ghi bna bna bna gma gma gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC102628860 EMB1865 LOC103838086 LOC103859751 LOC107931019 LOC121211241 LOC106360914 LOC106347029 LOC106439556 LOC100808013 LOC100788177 LOC100776626 LOC104882345 LOC7487071 LOC11437175 LOC11408111 LOC101266406 LOC102593632 LOC107800404 LOC107821642 LOC4339536 LOC103630698 LOC123066701 LOC123182945 LOC123159642 LOC123449348 LOC110430268 LOC100846803
Function* CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRS1 / YhbY (CRM) domain-containing protein CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM2, chloroplastic-like CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03060 Protein export 2
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102628860 821368 103838086 103859751 107931019 121211241 106360914 106347029 106439556 100808013 100788177 100776626 104882345 7487071 11437175 11408111 101266406 102593632 107800404 107821642 4339536 103630698 123066701 123182945 123159642 123449348 110430268 100846803
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