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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7487071   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 ppo-r.4   7487071   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 gma-u.5   100808013   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 gma-u.5   100788177   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 gma-u.5   100776626   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 mtr-u.5   11437175   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 mtr-u.5   11408111   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 ath-u.5   EMB1865   CRS1 / YhbY (CRM) domain-containing protein 
 vvi-u.5   104882345   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 sly-u.5   101266406   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 osa-u.5   4339536   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 zma-u.5   103630698   CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like 

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Top 50 coexpressed genes to 7487071 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7487071 (ppo-u.5 coexpression data)

CoexMap"7487071"


ppoLOC7487071 | Entrez gene ID : 7487071    
Species ppo gma mtr ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 2 3 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000375 [list] [network] RNA splicing, via transesterification reactions  (225 genes)  IEA  
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (348 genes)  IEA  
Protein XP_024438214.2 [sequence] [blastp]
XP_052301875.1 [sequence] [blastp]
XP_052301876.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_024438214.2)
chlo 10  (predict for XP_052301875.1)
chlo 10  (predict for XP_052301876.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_024438214.2)
chlo 8  (predict for XP_052301875.1)
chlo 8  (predict for XP_052301876.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7487071

.
ppo-r.4
for
7487071

.
gma-u.5
for
100808013

.
gma-u.5
for
100788177

.
gma-u.5
for
100776626

.
mtr-u.5
for
11437175

.
mtr-u.5
for
11408111

.
ath-u.5
for
EMB1865

.
vvi-u.5
for
104882345

.
sly-u.5
for
101266406

.
osa-u.5
for
4339536

.
zma-u.5
for
103630698

.


Ortholog ID: 8018
Species ath gma gma sly osa zma bra bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol EMB1865 LOC100808013 LOC100776626 LOC101266406 LOC4339536 LOC103630698 LOC103859751 LOC103838086 LOC104882345 LOC7487071 LOC11437175 LOC11408111 LOC123066701 LOC123159642 LOC123449348 LOC121211241 LOC107931019 LOC106347029 LOC106360914 LOC110430268 LOC102593632 LOC102628860 LOC100846803 LOC107821642 LOC107800404
Function* CRS1 / YhbY (CRM) domain-containing protein CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM2, chloroplastic-like CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03060 Protein export 2
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821368 100808013 100776626 101266406 4339536 103630698 103859751 103838086 104882345 7487071 11437175 11408111 123066701 123159642 123449348 121211241 107931019 106347029 106360914 110430268 102593632 102628860 100846803 107821642 107800404
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