ATTED-II : GeneCoexpression result

Species	Gene	Description
cit-r.1	102630991	uncharacterized LOC102630991
ath-u.5	AT3G50590	Transducin/WD40 repeat-like superfamily protein
bra-r.6	103840962	uncharacterized LOC103840962
ghi-r.1	107945408	uncharacterized LOC107945408
ghi-r.1	107960064	uncharacterized LOC107960064
ghi-r.1	107901492	uncharacterized LOC107901492
bna-r.1	106382413	uncharacterized LOC106382413
bna-r.1	106405670	uncharacterized LOC106405670
gma-u.5	100805443	uncharacterized LOC100805443
gma-u.5	100804284	uncharacterized LOC100804284
gma-u.5	100787845	uncharacterized LOC100787845
vvi-u.5	100263199	uncharacterized LOC100263199
ppo-u.5	18101185	uncharacterized LOC18101185
mtr-u.5	11410605	uncharacterized LOC11410605
mtr-u.5	11405197	uncharacterized LOC11405197
sly-u.5	101247774	uncharacterized LOC101247774
sot-r.1	102587522	uncharacterized LOC102587522
nta-r.1	107823311	uncharacterized LOC107823311
nta-r.1	107768083	uncharacterized LOC107768083
osa-u.5	4347020	uncharacterized LOC4347020
zma-u.5	100384052	uncharacterized LOC100384052
tae-r.2	123150368	uncharacterized LOC123150368
tae-r.2	123088583	uncharacterized LOC123088583
tae-r.2	123164538	uncharacterized LOC123164538
hvu-r.1	123398439	uncharacterized LOC123398439
sbi-r.1	8064510	uncharacterized LOC8064510
bdi-r.1	100842166	uncharacterized LOC100842166
cre-r.1	CHLRE_08g366150v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0000045 [list] [network] autophagosome assembly

(22 genes)

IEA

GO CC

GO:0000421 [list] [network] autophagosome membrane

(2 genes)

IEA

GO MF

GO:0005515 [list] [network] protein binding

(3939 genes)

IEA

Protein

XP_006466637.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, cyto 2, chlo 1, vacu 1, cysk 1, golg 1

(predict for XP_006466637.1)

Subcellular
localization
TargetP

other 8, mito 3

(predict for XP_006466637.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cit-r.1 for 102630991	ath-u.5 for AT3G50590	bra-r.6 for 103840962	ghi-r.1 for 107945408	ghi-r.1 for 107960064	ghi-r.1 for 107901492	bna-r.1 for 106382413	bna-r.1 for 106405670	gma-u.5 for 100805443	gma-u.5 for 100804284	gma-u.5 for 100787845	vvi-u.5 for 100263199	ppo-u.5 for 18101185	mtr-u.5 for 11410605	mtr-u.5 for 11405197	sly-u.5 for 101247774	sot-r.1 for 102587522	nta-r.1 for 107823311	nta-r.1 for 107768083	osa-u.5 for 4347020	zma-u.5 for 100384052	tae-r.2 for 123150368	tae-r.2 for 123088583	tae-r.2 for 123164538	hvu-r.1 for 123398439	sbi-r.1 for 8064510	bdi-r.1 for 100842166	cre-r.1 for CHLRE_08g366150v5

Ortholog

Ortholog ID: 6896

Species

cit

ath

bra

ghi

bna

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC102630991

Transducin/WD40 repeat-like superfamily protein

uncharacterized LOC103840962

uncharacterized LOC107960064

uncharacterized LOC107901492

uncharacterized LOC106382413

uncharacterized LOC106405670

uncharacterized LOC100805443

uncharacterized LOC100804284

uncharacterized LOC100787845

uncharacterized LOC100263199

uncharacterized LOC18101185

uncharacterized LOC11410605

uncharacterized LOC11405197

uncharacterized LOC101247774

uncharacterized LOC102587522

uncharacterized LOC107823311

uncharacterized LOC107768083

uncharacterized LOC4347020

uncharacterized LOC100384052

uncharacterized LOC123150368

uncharacterized LOC123164538

uncharacterized LOC123084446

uncharacterized LOC123398439

uncharacterized LOC8064510

uncharacterized LOC100842166

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	4
cit04142	Lysosome	2
cit04120	Ubiquitin mediated proteolysis	2
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	6
ath05100	Bacterial invasion of epithelial cells	3
ath04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04142	Lysosome	6
bra04144	Endocytosis	4
bra05100	Bacterial invasion of epithelial cells	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	5
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	4
bna04144	Endocytosis	2
bna00010	Glycolysis / Gluconeogenesis	2
bna00020	Citrate cycle (TCA cycle)	2
bna00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	5
bna04142	Lysosome	3
bna04144	Endocytosis	2
bna00010	Glycolysis / Gluconeogenesis	2
bna00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2
gma04120	Ubiquitin mediated proteolysis	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	4
gma04144	Endocytosis	4
gma05100	Bacterial invasion of epithelial cells	4
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00460	Cyanoamino acid metabolism	3
gma00500	Starch and sucrose metabolism	3
gma00999	Biosynthesis of various plant secondary metabolites	3
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	4
ppo04142	Lysosome	3
ppo05100	Bacterial invasion of epithelial cells	3
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	3
mtr04144	Endocytosis	2
mtr05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04142	Lysosome	2
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	5
sot04141	Protein processing in endoplasmic reticulum	3
sot04142	Lysosome	3
sot05100	Bacterial invasion of epithelial cells	3
sot03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	6
nta04142	Lysosome	4
nta05100	Bacterial invasion of epithelial cells	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	8
nta04142	Lysosome	6
nta05100	Bacterial invasion of epithelial cells	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	3
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	3
zma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04142	Lysosome	5
bdi04144	Endocytosis	3
bdi05100	Bacterial invasion of epithelial cells	2

Expression

Expression pattern

Entrez Gene ID^*

102630991

824223

103840962

107960064

107901492

106382413

106405670

100805443

100804284

100787845

100263199

18101185

11410605

11405197

101247774

102587522

107823311

107768083

4347020

100384052

123150368

123164538

123084446

123398439

8064510

100842166

5721662

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102630991 (cit-r.1 coexpression data)

Top 50 enrichment test to 102630991 (cit-r.1 coexpression data)


Species	cit	ath	bra	ghi	bna	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	1	1	1	3	2	3	1	1	2	1	1	2	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102630991 (cit-r.1 coexpression data)

Top 50 enrichment test to 102630991 (cit-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**