ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123088583	uncharacterized LOC123088583
tae-r.2	123150368	uncharacterized LOC123150368
tae-r.2	123084446	uncharacterized LOC123084446
tae-r.2	123164538	uncharacterized LOC123164538
hvu-r.1	123398439	uncharacterized LOC123398439
bdi-r.1	100842166	uncharacterized LOC100842166
osa-u.5	4347020	uncharacterized LOC4347020
zma-u.5	100384052	uncharacterized LOC100384052
sbi-r.1	8064510	uncharacterized LOC8064510
ath-u.5	AT3G50590	Transducin/WD40 repeat-like superfamily protein
gma-u.5	100805443	uncharacterized LOC100805443
gma-u.5	100804284	uncharacterized LOC100804284
gma-u.5	100787845	uncharacterized LOC100787845
sly-u.5	101247774	uncharacterized LOC101247774
bra-r.6	103840962	uncharacterized LOC103840962
vvi-u.5	100263199	uncharacterized LOC100263199
ppo-u.5	18101185	uncharacterized LOC18101185
mtr-u.5	11410605	uncharacterized LOC11410605
mtr-u.5	11405197	uncharacterized LOC11405197
ghi-r.1	107913206	uncharacterized LOC107913206
ghi-r.1	107960064	uncharacterized LOC107960064
bna-r.1	106405670	uncharacterized LOC106405670
bna-r.1	106382413	uncharacterized LOC106382413
sot-r.1	102587522	uncharacterized LOC102587522
cit-r.1	102630991	uncharacterized LOC102630991
nta-r.1	107823311	uncharacterized LOC107823311
nta-r.1	107768083	uncharacterized LOC107768083
cre-r.1	CHLRE_08g366150v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0000045 [list] [network] autophagosome assembly

(80 genes)

IEA

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(16249 genes)

IEA

Protein

XP_044366737.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, chlo 1, nucl 1, plas 1, cysk 1, golg 1, cysk_nucl 1, nucl_plas 1, golg_plas 1, cysk_plas 1

(predict for XP_044366737.1)

Subcellular
localization
TargetP

mito 5, other 3

(predict for XP_044366737.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123088583	tae-r.2 for 123150368	tae-r.2 for 123084446	tae-r.2 for 123164538	hvu-r.1 for 123398439	bdi-r.1 for 100842166	osa-u.5 for 4347020	zma-u.5 for 100384052	sbi-r.1 for 8064510	ath-u.5 for AT3G50590	gma-u.5 for 100805443	gma-u.5 for 100804284	gma-u.5 for 100787845	sly-u.5 for 101247774	bra-r.6 for 103840962	vvi-u.5 for 100263199	ppo-u.5 for 18101185	mtr-u.5 for 11410605	mtr-u.5 for 11405197	ghi-r.1 for 107913206	ghi-r.1 for 107960064	bna-r.1 for 106405670	bna-r.1 for 106382413	sot-r.1 for 102587522	cit-r.1 for 102630991	nta-r.1 for 107823311	nta-r.1 for 107768083	cre-r.1 for CHLRE_08g366150v5

Ortholog

Ortholog ID: 6896

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC123150368

uncharacterized LOC123084446

uncharacterized LOC123164538

uncharacterized LOC123398439

uncharacterized LOC100842166

uncharacterized LOC4347020

uncharacterized LOC100384052

uncharacterized LOC8064510

Transducin/WD40 repeat-like superfamily protein

uncharacterized LOC100805443

uncharacterized LOC100804284

uncharacterized LOC100787845

uncharacterized LOC101247774

uncharacterized LOC103840962

uncharacterized LOC100263199

uncharacterized LOC18101185

uncharacterized LOC11410605

uncharacterized LOC11405197

uncharacterized LOC107960064

uncharacterized LOC107901492

uncharacterized LOC106405670

uncharacterized LOC106382413

uncharacterized LOC102587522

uncharacterized LOC102630991

uncharacterized LOC107823311

uncharacterized LOC107768083

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04142	Lysosome	5
bdi04144	Endocytosis	3
bdi05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	3
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	3
zma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	6
ath05100	Bacterial invasion of epithelial cells	3
ath04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2
gma04120	Ubiquitin mediated proteolysis	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	4
gma04144	Endocytosis	4
gma05100	Bacterial invasion of epithelial cells	4
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00460	Cyanoamino acid metabolism	3
gma00500	Starch and sucrose metabolism	3
gma00999	Biosynthesis of various plant secondary metabolites	3
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04142	Lysosome	2
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04142	Lysosome	6
bra04144	Endocytosis	4
bra05100	Bacterial invasion of epithelial cells	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	4
ppo04142	Lysosome	3
ppo05100	Bacterial invasion of epithelial cells	3
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	3
mtr04144	Endocytosis	2
mtr05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	5
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	5
bna04142	Lysosome	3
bna04144	Endocytosis	2
bna00010	Glycolysis / Gluconeogenesis	2
bna00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	4
bna04144	Endocytosis	2
bna00010	Glycolysis / Gluconeogenesis	2
bna00020	Citrate cycle (TCA cycle)	2
bna00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	5
sot04141	Protein processing in endoplasmic reticulum	3
sot04142	Lysosome	3
sot05100	Bacterial invasion of epithelial cells	3
sot03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	4
cit04142	Lysosome	2
cit04120	Ubiquitin mediated proteolysis	2
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	6
nta04142	Lysosome	4
nta05100	Bacterial invasion of epithelial cells	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	8
nta04142	Lysosome	6
nta05100	Bacterial invasion of epithelial cells	6

Expression

Expression pattern

Entrez Gene ID^*

123150368

123084446

123164538

123398439

100842166

4347020

100384052

8064510

824223

100805443

100804284

100787845

101247774

103840962

100263199

18101185

11410605

11405197

107960064

107901492

106405670

106382413

102587522

102630991

107823311

107768083

5721662

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123088583 (tae-r.2 coexpression data)

Top 50 enrichment test to 123088583 (tae-r.2 coexpression data)


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	1	1	1	1	1	1	3	1	1	1	1	2	2	2	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123088583 (tae-r.2 coexpression data)

Top 50 enrichment test to 123088583 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**