ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100820501	putative E3 ubiquitin-protein ligase LIN-1
vvi-u.5	100260408	putative E3 ubiquitin-protein ligase LIN-1
ppo-u.5	7455762	putative E3 ubiquitin-protein ligase LIN-2
ppo-u.5	7463607	putative E3 ubiquitin-protein ligase LIN-2
mtr-u.5	11414149	putative E3 ubiquitin-protein ligase LIN
sly-u.5	101265762	putative E3 ubiquitin-protein ligase LIN-2
osa-u.5	9268164	putative E3 ubiquitin-protein ligase LIN-2

functional annotation

KEGG

GO BP

GO:0016567 [list] [network] protein ubiquitination

(265 genes)

IEA

GO CC

GO MF

GO:0004842 [list] [network] ubiquitin-protein transferase activity

(249 genes)

IEA

Protein

XP_015380791.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 4, cysk 1

(predict for XP_015380791.1)

Subcellular
localization
TargetP

chlo 4

(predict for XP_015380791.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100820501	vvi-u.5 for 100260408	ppo-u.5 for 7455762	ppo-u.5 for 7463607	mtr-u.5 for 11414149	sly-u.5 for 101265762	osa-u.5 for 9268164

Ortholog ID: 11831

Species

ghi

gma

vvi

ppo

mtr

sly

sot

nta

osa

tae

hvu

bdi

Symbol

Function^*

putative E3 ubiquitin-protein ligase LIN-1

putative E3 ubiquitin-protein ligase LIN-2

putative E3 ubiquitin-protein ligase LIN

putative E3 ubiquitin-protein ligase LIN-2

uncharacterized LOC102591146

putative E3 ubiquitin-protein ligase LIN-1

putative E3 ubiquitin-protein ligase LIN

putative E3 ubiquitin-protein ligase LIN-2

uncharacterized LOC123046695

uncharacterized LOC123427842

putative E3 ubiquitin-protein ligase LIN-1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	3
gma00562	Inositol phosphate metabolism	2
gma04070	Phosphatidylinositol signaling system	2
gma04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03022	Basal transcription factors	2
nta03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03022	Basal transcription factors	2
nta03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00561	Glycerolipid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107901995

107893937

100820501

100260408

7455762

7463607

11414149

101265762

102591146

107776110

107812306

9268164

123046695

123427842

100821474

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100820501 (gma-u.5 coexpression data)

Top 50 enrichment test to 100820501 (gma-u.5 coexpression data)


Species	gma	vvi	ppo	mtr	sly	osa	hvu	zma	bna	cit	bra	ghi	sbi	bdi	ath	nta	tae	cre	sot
Paralog	1	1	2	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100820501 (gma-u.5 coexpression data)

Top 50 enrichment test to 100820501 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**