ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	102660265	pentatricopeptide repeat-containing protein At3g05340
gma-r.7	102660265	pentatricopeptide repeat-containing protein At3g05340
mtr-u.5	11423164	pentatricopeptide repeat-containing protein At3g05340
ppo-u.5	7481754	pentatricopeptide repeat-containing protein At3g05340
ath-u.5	AT3G05340	Tetratricopeptide repeat (TPR)-like superfamily protein
bra-r.6	103870830	pentatricopeptide repeat-containing protein At3g05340
ghi-r.1	107918402	pentatricopeptide repeat-containing protein At3g05340-like
ghi-r.1	107893588	pentatricopeptide repeat-containing protein At3g05340
bna-r.1	106453044	pentatricopeptide repeat-containing protein At3g05340
bna-r.1	125587969	pentatricopeptide repeat-containing protein At3g05340-like
cit-r.1	102617836	pentatricopeptide repeat-containing protein At3g05340-like
sly-u.5	101264978	pentatricopeptide repeat-containing protein At3g05340
sot-r.1	102578274	pentatricopeptide repeat-containing protein At3g05340
nta-r.1	107787871	pentatricopeptide repeat-containing protein At3g05340-like
nta-r.1	107799140	pentatricopeptide repeat-containing protein At3g05340-like
osa-u.5	4337804	pentatricopeptide repeat-containing protein At3g05340
zma-u.5	100383629	pentatricopeptide repeat family protein
sbi-r.1	8069489	pentatricopeptide repeat-containing protein At3g05340
bdi-r.1	100838377	pentatricopeptide repeat-containing protein At3g05340

Annotation

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(407 genes)

IEA

GO CC

GO:0043231 [list] [network] intracellular membrane-bounded organelle

(10455 genes)

IEA

GO MF

GO:0003723 [list] [network] RNA binding	(2019 genes)	IEA
GO:0005515 [list] [network] protein binding	(7243 genes)	IEA

Protein

XP_006577247.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, nucl 2, E.R. 2, mito 1, E.R._vacu 1

(predict for XP_006577247.1)

Subcellular
localization
TargetP

chlo 5

(predict for XP_006577247.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 102660265	gma-r.7 for 102660265	mtr-u.5 for 11423164	ppo-u.5 for 7481754	ath-u.5 for AT3G05340	bra-r.6 for 103870830	ghi-r.1 for 107918402	ghi-r.1 for 107893588	bna-r.1 for 106453044	bna-r.1 for 125587969	cit-r.1 for 102617836	sly-u.5 for 101264978	sot-r.1 for 102578274	nta-r.1 for 107787871	nta-r.1 for 107799140	osa-u.5 for 4337804	zma-u.5 for 100383629	sbi-r.1 for 8069489	bdi-r.1 for 100838377

Ortholog

Ortholog ID: 11285

Species

gma

mtr

ppo

ath

bra

ghi

bna

cit

sly

sot

nta

osa

zma

sbi

bdi

Symbol

Function^*