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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5  11423164  pentatricopeptide repeat-containing protein At3g05340 
 mtr-r.5  11423164  pentatricopeptide repeat-containing protein At3g05340 
 mtr-m.5  11423164  pentatricopeptide repeat-containing protein At3g05340 
 gma-u.5  102660265  pentatricopeptide repeat-containing protein At3g05340 
 ppo-u.5  7481754  pentatricopeptide repeat-containing protein At3g05340 
 ath-u.5  AT3G05340  Tetratricopeptide repeat (TPR)-like superfamily protein 
 sly-u.5  101264978  pentatricopeptide repeat-containing protein At3g05340 
 osa-u.5  4337804  pentatricopeptide repeat-containing protein At3g05340 
 zma-u.5  100383629  pentatricopeptide repeat family protein 

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Top 50 coexpressed genes to 11423164 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11423164 (mtr-u.5 coexpression data)

CoexMap"11423164"


mtrLOC11423164 | Entrez gene ID : 11423164
Species mtr gma ppo ath sly osa zma bdi hvu bra vvi cit bna sbi ghi sot nta cre tae
Paralog 3 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5207 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_003626291.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  chlo_mito 2,  cysk_nucl 1  (predict for XP_003626291.3)
Subcellular
localization
TargetP
other 3  (predict for XP_003626291.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

mtr-u.5
for
11423164


mtr-r.5
for
11423164


mtr-m.5
for
11423164


gma-u.5
for
102660265


ppo-u.5
for
7481754


ath-u.5
for
AT3G05340


sly-u.5
for
101264978


osa-u.5
for
4337804


zma-u.5
for
100383629



Ortholog ID: 11285
Species mtr gma ppo ath bra ghi ghi bna bna cit sly sot nta nta osa zma sbi bdi
Symbol LOC11423164 LOC102660265 LOC7481754 AT3G05340 LOC103870830 LOC107918402 LOC107893588 LOC125587969 LOC106453044 LOC102617836 LOC101264978 LOC102578274 LOC107787871 LOC107799140 LOC4337804 LOC100383629 LOC8069489 LOC100838377
Function* pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At3g05340 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At3g05340-like pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At3g05340-like pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At3g05340-like pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At3g05340-like pentatricopeptide repeat-containing protein At3g05340-like pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat family protein pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At3g05340
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11423164 102660265 7481754 819698 103870830 107918402 107893588 125587969 106453044 102617836 101264978 102578274 107787871 107799140 4337804 100383629 8069489 100838377
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