Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   102661431   nuclear transcription factor Y subunit B-2 
 gma-r.7   102661431   nuclear transcription factor Y subunit B-2 
 gma-u.5   100809851   probable methionyl-tRNA synthetase-like 
 gma-u.5   100779769   aminoacyl tRNA synthase complex-interacting multifunctional protein 1 
 mtr-u.5   25489821   aminoacyl tRNA synthase complex-interacting multifunctional protein 1 
 ppo-u.5   7455238   uncharacterized LOC7455238 
 ath-u.5   AT2G40660   Nucleic acid-binding, OB-fold-like protein 
 vvi-u.5   100251895   uncharacterized LOC100251895 
 sly-u.5   101248684   uncharacterized LOC101248684 
 osa-u.5   4327613   uncharacterized LOC4327613 
 zma-u.5   100282083   uncharacterized LOC100282083 

close


Top 50 coexpressed genes to 102661431 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 102661431 (gma-u.5 coexpression data)

CoexMap"102661431"


gmaLOC102661431 | Entrez gene ID : 102661431    
Species gma mtr ppo ath vvi sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (844 genes)  IEA  
GO CC
GO:0016602 [list] [network] CCAAT-binding factor complex  (44 genes)  IEA  
GO MF
GO:0001228 [list] [network] DNA-binding transcription activator activity, RNA polymerase II-specific  (29 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (167 genes)  IEA  
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (449 genes)  IEA  
Protein XP_006587400.1 [sequence] [blastp]
XP_006587401.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  pero 2,  cyto 1,  nucl 1,  mito 1,  plas 1,  extr 1,  vacu 1,  nucl_plas 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_006587400.1)
chlo 4,  pero 2,  nucl 1,  cyto_pero 1  (predict for XP_006587401.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006587400.1)
other 8  (predict for XP_006587401.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
102661431
gma-r.7
for
102661431
gma-u.5
for
100809851
gma-u.5
for
100779769
mtr-u.5
for
25489821
ppo-u.5
for
7455238
ath-u.5
for
AT2G40660
vvi-u.5
for
100251895
sly-u.5
for
101248684
osa-u.5
for
4327613
zma-u.5
for
100282083


Ortholog ID: 9428
Species gma gma mtr ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC102661431 LOC100809851 LOC25489821 LOC7455238 AT2G40660 LOC103866513 LOC100251895 LOC107916292 LOC121222464 LOC106450692 LOC106396792 LOC102610619 LOC101248684 LOC102591263 LOC107818565 LOC107759049 LOC4327613 LOC100282083 LOC123079581 LOC123062442 LOC123444722 LOC110434199 LOC100837985 CHLRE_03g145967v5
Function* nuclear transcription factor Y subunit B-2 probable methionyl-tRNA synthetase-like aminoacyl tRNA synthase complex-interacting multifunctional protein 1 uncharacterized LOC7455238 Nucleic acid-binding, OB-fold-like protein tRNA-aminoacylation cofactor arc1 uncharacterized LOC100251895 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 tRNA-aminoacylation cofactor arc1 uncharacterized LOC102610619 uncharacterized LOC101248684 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 uncharacterized LOC107818565 uncharacterized LOC107759049 uncharacterized LOC4327613 uncharacterized LOC100282083 methionine--tRNA ligase, cytoplasmic methionine--tRNA ligase, cytoplasmic methionine--tRNA ligase, cytoplasmic aminoacyl tRNA synthase complex-interacting multifunctional protein 1 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 4
ppo00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00261 Monobactam biosynthesis 2
ghi00300 Lysine biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly03013 Nucleocytoplasmic transport 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot00230 Purine metabolism 2
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 6
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 3
cre03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102661431 100809851 25489821 7455238 818661 103866513 100251895 107916292 121222464 106450692 106396792 102610619 101248684 102591263 107818565 107759049 4327613 100282083 123079581 123062442 123444722 110434199 100837985 5721238
The preparation time of this page was 0.1 [sec].