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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7467917   uncharacterized LOC7467917 
 ppo-u.5   18094363   E3 ubiquitin-protein ligase RSL1 
 vvi-u.5   100252570   E3 ubiquitin-protein ligase RSL1 
 vvi-u.5   100256964   E3 ubiquitin-protein ligase RSL1 
 ghi-r.1   107906024   probable E3 ubiquitin-protein ligase RNF217 
 ghi-r.1   107907073   ranBP-type and C3HC4-type zinc finger-containing protein 1 
 cit-r.1   102612454   E3 ubiquitin-protein ligase RSL1-like 
 cit-r.1   102612755   E3 ubiquitin-protein ligase RSL1-like 
 cit-r.1   102613379   E3 ubiquitin-protein ligase RSL1-like 
 sly-u.5   101243987   E3 ubiquitin-protein ligase RSL1-like 
 sly-u.5   101249062   E3 ubiquitin-protein ligase RSL1-like 
 sly-u.5   101250202   E3 ubiquitin-protein ligase RSL1 
 sot-r.1   102596349   probable E3 ubiquitin-protein ligase RNF217 
 sot-r.1   102597290   probable E3 ubiquitin-protein ligase RNF217 
 nta-r.1   107771754   E3 ubiquitin-protein ligase RSL1 
 osa-u.5   4346618   E3 ubiquitin-protein ligase RSL1 
 zma-u.5   100381983   putative RING zinc finger domain superfamily protein 
 zma-u.5   100280727   ubiquitin-protein ligase/ zinc ion binding protein 
 zma-u.5   100194163   putative RING zinc finger domain superfamily protein 
 sbi-r.1   8062109   uncharacterized LOC8062109 
 sbi-r.1   8062110   probable E3 ubiquitin-protein ligase RNF144A-B 
 bdi-r.1   100827708   uncharacterized protein DDB_G0292642 
 cre-r.1   CHLRE_03g150850v5   uncharacterized protein 
 cre-r.1   CHLRE_05g238374v5   uncharacterized protein 
 cre-r.1   CHLRE_01g060712v5   uncharacterized protein 

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Top 50 coexpressed genes to 7467917 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7467917 (ppo-u.5 coexpression data)

CoexMap"102668873"


gmaLOC102668873 | Entrez gene ID : 102668873    
Species ppo vvi ghi cit sly sot nta osa zma sbi bdi cre gma bra ath tae mtr hvu bna
Paralog 2 2 2 3 3 2 1 1 3 2 1 3 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032436 [list] [network] positive regulation of proteasomal ubiquitin-dependent protein catabolic process  (41 genes)  IEA  
GO:0000209 [list] [network] protein polyubiquitination  (127 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (481 genes)  IEA  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (283 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0031624 [list] [network] ubiquitin conjugating enzyme binding  (34 genes)  IEA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (292 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
Protein XP_040867891.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 3  (predict for XP_040867891.1)
Subcellular
localization
TargetP
other 7  (predict for XP_040867891.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7467917
ppo-u.5
for
18094363
vvi-u.5
for
100252570
vvi-u.5
for
100256964
ghi-r.1
for
107906024
ghi-r.1
for
107907073
cit-r.1
for
102612454
cit-r.1
for
102612755
cit-r.1
for
102613379
sly-u.5
for
101243987
sly-u.5
for
101249062
sly-u.5
for
101250202
sot-r.1
for
102596349
sot-r.1
for
102597290
nta-r.1
for
107771754
osa-u.5
for
4346618
zma-u.5
for
100381983
zma-u.5
for
100280727
zma-u.5
for
100194163
sbi-r.1
for
8062109
sbi-r.1
for
8062110
bdi-r.1
for
100827708
cre-r.1
for
CHLRE_03g150850v5
cre-r.1
for
CHLRE_05g238374v5
cre-r.1
for
CHLRE_01g060712v5


Ortholog ID: 369
Species mtr ppo ppo vvi vvi ghi ghi ghi cit cit sly sly sot nta zma zma zma hvu sbi sbi bdi cre cre cre
Symbol LOC25486596 LOC7467917 LOC18094363 LOC100252570 LOC100256964 LOC107907073 LOC107958333 LOC107958821 LOC102612755 LOC102618889 LOC101249062 LOC101247495 LOC102585890 LOC107792398 LOC100381983 LOC100280727 LOC100194163 LOC123431232 LOC8062109 LOC8062110 LOC100827708 CHLRE_03g150850v5 CHLRE_05g238374v5 CHLRE_01g060712v5
Function* probable E3 ubiquitin-protein ligase RNF217 uncharacterized LOC7467917 E3 ubiquitin-protein ligase RSL1 E3 ubiquitin-protein ligase RSL1 E3 ubiquitin-protein ligase RSL1 ranBP-type and C3HC4-type zinc finger-containing protein 1 probable E3 ubiquitin-protein ligase RNF144A-B probable E3 ubiquitin-protein ligase RNF217 E3 ubiquitin-protein ligase RSL1-like E3 ubiquitin-protein ligase RSL1-like E3 ubiquitin-protein ligase RSL1-like E3 ubiquitin-protein ligase RSL1 probable E3 ubiquitin-protein ligase RNF217 E3 ubiquitin-protein ligase RSL1 putative RING zinc finger domain superfamily protein ubiquitin-protein ligase/ zinc ion binding protein putative RING zinc finger domain superfamily protein uncharacterized LOC123431232 uncharacterized LOC8062109 probable E3 ubiquitin-protein ligase RNF144A-B uncharacterized protein DDB_G0292642 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03013 Nucleocytoplasmic transport 4
mtr03020 RNA polymerase 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 3
ppo03420 Nucleotide excision repair 3
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 2
cre03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25486596 7467917 18094363 100252570 100256964 107907073 107958333 107958821 102612755 102618889 101249062 101247495 102585890 107792398 100381983 100280727 100194163 123431232 8062109 8062110 100827708 5721143 5723282 5725742
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