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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103625787   protein GLE1 
 zma-r.6   103625787   protein GLE1 
 zma-m.5   103625787   protein GLE1 
 zma-u.5   103644232   protein GLE1 
 sbi-r.1   8061421   protein GLE1 
 osa-u.5   4329863   mRNA export factor GLE1 
 tae-r.2   123127596   protein GLE1 
 tae-r.2   123137330   protein GLE1 
 hvu-r.1   123401227   protein GLE1-like 
 bdi-r.1   100844247   protein GLE1 
 bdi-r.1   100832549   protein GLE1 
 ath-u.5   GLE1   nucleoporin GLE1-like protein 
 gma-u.5   100802744   protein GLE1 
 sly-u.5   101248103   mRNA export factor GLE1 
 bra-r.6   103843077   protein GLE1 
 vvi-u.5   100245667   mRNA export factor GLE1 
 ppo-u.5   7480949   mRNA export factor GLE1 
 mtr-u.5   11414779   protein GLE1 
 ghi-r.1   107933406   protein GLE1 
 ghi-r.1   107898649   protein GLE1 
 bna-r.1   125578596   mRNA export factor GLE1-like 
 bna-r.1   106411747   mRNA export factor GLE1-like 
 sot-r.1   102586428   protein GLE1 
 cit-r.1   102623856   mRNA export factor GLE1 
 nta-r.1   107770120   mRNA export factor GLE1 
 nta-r.1   107775195   mRNA export factor GLE1-like 
 nta-r.1   107818718   mRNA export factor GLE1-like 
 cre-r.1   CHLRE_06g300900v5   uncharacterized protein 

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Top 50 coexpressed genes to 103625787 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103625787 (zma-u.5 coexpression data)

CoexMap"103625787"


zmaLOC103625787 | Entrez gene ID : 103625787      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 1 1 2 1 2 1 1 1 1 1 1 1 2 2 1 1 3 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03013 [list] [network] Nucleocytoplasmic transport (144 genes)
zma03015 [list] [network] mRNA surveillance pathway (165 genes)
GO BP
GO:0016973 [list] [network] poly(A)+ mRNA export from nucleus  (6 genes)  IEA  
GO CC
GO:0044614 [list] [network] nuclear pore cytoplasmic filaments  (4 genes)  IEA  
GO:0005643 [list] [network] nuclear pore  (55 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5465 genes)  IEA  
GO MF
GO:0000822 [list] [network] inositol hexakisphosphate binding  (2 genes)  IEA  
GO:0031369 [list] [network] translation initiation factor binding  (16 genes)  IEA  
GO:0005543 [list] [network] phospholipid binding  (147 genes)  IEA  
Protein XP_008644406.1 [sequence] [blastp]
XP_008644407.1 [sequence] [blastp]
XP_020393418.1 [sequence] [blastp]
XP_020393419.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 2  (predict for XP_008644406.1)
cyto 7,  nucl 2  (predict for XP_008644407.1)
cyto 6,  nucl 1,  mito 1,  plas 1,  pero 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_020393418.1)
cyto 6,  nucl 1,  mito 1,  plas 1,  pero 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_020393419.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for XP_008644406.1)
other 6,  mito 4  (predict for XP_008644407.1)
other 6,  mito 4  (predict for XP_020393418.1)
other 6,  mito 4  (predict for XP_020393419.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103625787
zma-r.6
for
103625787
zma-m.5
for
103625787
zma-u.5
for
103644232
sbi-r.1
for
8061421
osa-u.5
for
4329863
tae-r.2
for
123127596
tae-r.2
for
123137330
hvu-r.1
for
123401227
bdi-r.1
for
100844247
bdi-r.1
for
100832549
ath-u.5
for
GLE1
gma-u.5
for
100802744
sly-u.5
for
101248103
bra-r.6
for
103843077
vvi-u.5
for
100245667
ppo-u.5
for
7480949
mtr-u.5
for
11414779
ghi-r.1
for
107933406
ghi-r.1
for
107898649
bna-r.1
for
125578596
bna-r.1
for
106411747
sot-r.1
for
102586428
cit-r.1
for
102623856
nta-r.1
for
107770120
nta-r.1
for
107775195
nta-r.1
for
107818718
cre-r.1
for
CHLRE_06g300900v5


Ortholog ID: 6599
Species zma zma sbi osa tae tae hvu bdi bdi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta nta cre
Symbol LOC103625787 LOC103644232 LOC8061421 LOC4329863 LOC123127596 LOC123137330 LOC123401227 LOC100844247 LOC100832549 GLE1 LOC100802744 LOC101248103 LOC103843077 LOC100245667 LOC7480949 LOC11414779 LOC107933406 LOC107898649 LOC125578596 LOC106411747 LOC102586428 LOC102623856 LOC107770120 LOC107815577 LOC107790159 CHLRE_06g300900v5
Function* protein GLE1 protein GLE1 protein GLE1 mRNA export factor GLE1 protein GLE1 protein GLE1 protein GLE1-like protein GLE1 protein GLE1 nucleoporin GLE1-like protein protein GLE1 mRNA export factor GLE1 protein GLE1 mRNA export factor GLE1 mRNA export factor GLE1 protein GLE1 protein GLE1 protein GLE1 mRNA export factor GLE1-like mRNA export factor GLE1-like protein GLE1 mRNA export factor GLE1 mRNA export factor GLE1 mRNA export factor GLE1-like mRNA export factor GLE1-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03460 Fanconi anemia pathway 2
zma03008 Ribosome biogenesis in eukaryotes 2
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03013 Nucleocytoplasmic transport 2
sbi04136 Autophagy - other 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 4
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
hvu03015 mRNA surveillance pathway 3
hvu03082 ATP-dependent chromatin remodeling 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 4
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 4
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath03040 Spliceosome 2
ath03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra04120 Ubiquitin mediated proteolysis 3
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03250 Viral life cycle - HIV-1 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
nta00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta00790 Folate biosynthesis 2
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103625787 103644232 8061421 4329863 123127596 123137330 123401227 100844247 100832549 837869 100802744 101248103 103843077 100245667 7480949 11414779 107933406 107898649 125578596 106411747 102586428 102623856 107770120 107815577 107790159 5716970
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