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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103625824   transcription factor PCF6 
 zma-r.6   103625824   transcription factor PCF6 
 zma-u.5   109940870   transcription factor PCF6 
 zma-u.5   100281398   uncharacterized LOC100281398 
 zma-u.5   100383331   uncharacterized LOC100383331 
 sbi-r.1   8086415   transcription factor PCF6 
 sbi-r.1   8083919   transcription factor PCF6 
 osa-u.5   4334346   transcription factor PCF6-like 
 osa-u.5   4342416   transcription factor PCF6 
 tae-r.2   123105313   transcription factor PCF6 
 tae-r.2   123123106   transcription factor PCF6 
 tae-r.2   123188740   transcription factor PCF6 
 hvu-r.1   123426259   transcription factor PCF6-like 
 hvu-r.1   123452576   transcription factor PCF6-like 
 bdi-r.1   100827523   transcription factor PCF6 
 bdi-r.1   100834650   transcription factor PCF6 
 ath-u.5   TCP2   TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 
 ath-u.5   TCP24   TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 
 gma-u.5   100816799   transcription factor TCP2 
 gma-u.5   100806032   transcription factor TCP2 
 gma-u.5   100802134   transcription factor TCP2 
 sly-u.5   TCP24   TCP transcription factor 24 
 sly-u.5   101246741   transcription factor TCP2-like 
 bra-r.6   103856308   transcription factor TCP2 
 bra-r.6   103835232   transcription factor TCP24 
 bra-r.6   103860988   transcription factor TCP2 
 vvi-u.5   100249845   transcription factor TCP2 
 ppo-u.5   7470181   transcription factor TCP2 
 ppo-u.5   7497052   transcription factor TCP2 
 mtr-u.5   120577367   transcription factor TCP2 
 ghi-r.1   107913803   transcription factor TCP2 
 ghi-r.1   107905972   transcription factor TCP2 
 ghi-r.1   107959965   transcription factor TCP2 
 bna-r.1   125575242   transcription factor TCP2-like 
 bna-r.1   106440183   transcription factor TCP2-like 
 bna-r.1   106361594   transcription factor TCP24-like 
 sot-r.1   102582424   transcription factor TCP2-like 
 cit-r.1   102617811   transcription factor TCP2 
 nta-r.1   107789416   transcription factor TCP2 
 nta-r.1   107799751   transcription factor TCP2 
 nta-r.1   107829243   transcription factor TCP2 

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Top 50 coexpressed genes to 103625824 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103625824 (zma-u.5 coexpression data)

CoexMap"103625824"


zmaLOC103625824 | Entrez gene ID : 103625824      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 5 2 2 3 2 2 2 3 2 3 1 2 1 3 3 1 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:2000032 [list] [network] regulation of secondary shoot formation  (10 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (823 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1355 genes)  IEA  
Protein XP_008644443.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  mito 1  (predict for XP_008644443.1)
Subcellular
localization
TargetP
other 3,  chlo 3,  mito 3  (predict for XP_008644443.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103625824
zma-r.6
for
103625824
zma-u.5
for
109940870
zma-u.5
for
100281398
zma-u.5
for
100383331
sbi-r.1
for
8086415
sbi-r.1
for
8083919
osa-u.5
for
4334346
osa-u.5
for
4342416
tae-r.2
for
123105313
tae-r.2
for
123123106
tae-r.2
for
123188740
hvu-r.1
for
123426259
hvu-r.1
for
123452576
bdi-r.1
for
100827523
bdi-r.1
for
100834650
ath-u.5
for
TCP2
ath-u.5
for
TCP24
gma-u.5
for
100816799
gma-u.5
for
100806032
gma-u.5
for
100802134
sly-u.5
for
TCP24
sly-u.5
for
101246741
bra-r.6
for
103856308
bra-r.6
for
103835232
bra-r.6
for
103860988
vvi-u.5
for
100249845
ppo-u.5
for
7470181
ppo-u.5
for
7497052
mtr-u.5
for
120577367
ghi-r.1
for
107913803
ghi-r.1
for
107905972
ghi-r.1
for
107959965
bna-r.1
for
125575242
bna-r.1
for
106440183
bna-r.1
for
106361594
sot-r.1
for
102582424
cit-r.1
for
102617811
nta-r.1
for
107789416
nta-r.1
for
107799751
nta-r.1
for
107829243


Ortholog ID: 3247
Species zma zma zma sbi sbi osa osa tae tae tae hvu hvu bdi bdi ath ath gma gma gma sly sly bra bra bra vvi ppo ppo mtr ghi ghi ghi bna bna bna sot cit nta nta nta
Symbol LOC103625824 LOC100281398 LOC100383331 LOC8086415 LOC8083919 LOC4334346 LOC4342416 LOC123105313 LOC123188740 LOC123052856 LOC123426259 LOC123452576 LOC100827523 LOC100834650 TCP2 TCP24 LOC100806032 LOC100802134 LOC100787772 TCP24 LOC101246741 LOC103856308 LOC103835232 LOC103840425 LOC100249845 LOC7470181 LOC7497052 LOC120577367 LOC107913803 LOC107905972 LOC107959965 LOC125575242 LOC106383147 LOC106424390 LOC102582424 LOC102617811 LOC107789416 LOC107799751 LOC107777006
Function* transcription factor PCF6 uncharacterized LOC100281398 uncharacterized LOC100383331 transcription factor PCF6 transcription factor PCF6 transcription factor PCF6-like transcription factor PCF6 transcription factor PCF6 transcription factor PCF6 transcription factor PCF6 transcription factor PCF6-like transcription factor PCF6-like transcription factor PCF6 transcription factor PCF6 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 transcription factor TCP2 transcription factor TCP2 transcription factor TCP2 TCP transcription factor 24 transcription factor TCP2-like transcription factor TCP2 transcription factor TCP24 transcription factor TCP24 transcription factor TCP2 transcription factor TCP2 transcription factor TCP2 transcription factor TCP2 transcription factor TCP2 transcription factor TCP2 transcription factor TCP2 transcription factor TCP2-like transcription factor TCP24-like transcription factor TCP2-like transcription factor TCP2-like transcription factor TCP2 transcription factor TCP2 transcription factor TCP2 transcription factor TCP2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00561 Glycerolipid metabolism 2
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00561 Glycerolipid metabolism 2
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00100 Steroid biosynthesis 2
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00562 Inositol phosphate metabolism 2
ppo04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00561 Glycerolipid metabolism 2
cit00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103625824 100281398 100383331 8086415 8083919 4334346 4342416 123105313 123188740 123052856 123426259 123452576 100827523 100834650 827568 839901 100806032 100802134 100787772 100736524 101246741 103856308 103835232 103840425 100249845 7470181 7497052 120577367 107913803 107905972 107959965 125575242 106383147 106424390 102582424 102617811 107789416 107799751 107777006
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