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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103632101   splicing factor 3B subunit 3 
 zma-r.6   103632101   splicing factor 3B subunit 3 
 sbi-r.1   8063686   splicing factor 3B subunit 3 
 osa-u.5   4342674   uncharacterized LOC4342674 
 tae-r.2   123188638   splicing factor 3B subunit 3 
 tae-r.2   123052774   splicing factor 3B subunit 3 
 tae-r.2   123044856   splicing factor 3B subunit 3 
 hvu-r.1   123426147   DNA damage-binding protein 1 
 bdi-r.1   100839023   splicing factor 3B subunit 3 
 ath-u.5   AT3G11960   Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 
 gma-u.5   100806799   splicing factor 3B subunit 3 
 gma-u.5   100799711   splicing factor 3B subunit 3 
 sly-u.5   101261183   uncharacterized LOC101261183 
 bra-r.6   103870295   splicing factor 3B subunit 3 
 bra-r.6   103859423   spliceosome-associated protein 130 A 
 vvi-u.5   100252096   pre-mRNA-splicing factor prp12 
 ppo-u.5   7455620   uncharacterized LOC7455620 
 mtr-u.5   25499564   splicing factor 3B subunit 3 
 ghi-r.1   107891227   splicing factor 3B subunit 3 
 ghi-r.1   107889475   splicing factor 3B subunit 3 
 bna-r.1   106401173   spliceosome-associated protein 130 A-like 
 bna-r.1   106353072   spliceosome-associated protein 130 A 
 bna-r.1   106415087   splicing factor 3B subunit 3 
 sot-r.1   102600929   pre-mRNA-splicing factor prp12 
 cit-r.1   102624787   uncharacterized LOC102624787 
 nta-r.1   107775427   uncharacterized LOC107775427 
 nta-r.1   107784860   uncharacterized LOC107784860 

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Top 50 coexpressed genes to 103632101 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103632101 (zma-u.5 coexpression data)

CoexMap"103632101"


zmaLOC103632101 | Entrez gene ID : 103632101      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 1 1 3 1 1 1 2 1 2 1 1 1 2 3 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03040 [list] [network] Spliceosome (506 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0003676 [list] [network] nucleic acid binding  (4170 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein XP_008652174.1 [sequence] [blastp]
XP_008652175.1 [sequence] [blastp]
XP_008652176.1 [sequence] [blastp]
XP_020396719.1 [sequence] [blastp]
XP_020396720.1 [sequence] [blastp]
XP_035816749.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 8,  E.R. 1  (predict for XP_008652174.1)
plas 8,  E.R. 1  (predict for XP_008652175.1)
plas 9,  nucl 1,  vacu 1  (predict for XP_008652176.1)
plas 9,  nucl 1,  vacu 1  (predict for XP_020396719.1)
plas 9,  nucl 1,  vacu 1  (predict for XP_020396720.1)
plas 9,  nucl 1,  vacu 1  (predict for XP_035816749.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_008652174.1)
chlo 9  (predict for XP_008652175.1)
other 8  (predict for XP_008652176.1)
other 8  (predict for XP_020396719.1)
other 8  (predict for XP_020396720.1)
other 8  (predict for XP_035816749.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103632101
zma-r.6
for
103632101
sbi-r.1
for
8063686
osa-u.5
for
4342674
tae-r.2
for
123188638
tae-r.2
for
123052774
tae-r.2
for
123044856
hvu-r.1
for
123426147
bdi-r.1
for
100839023
ath-u.5
for
AT3G11960
gma-u.5
for
100806799
gma-u.5
for
100799711
sly-u.5
for
101261183
bra-r.6
for
103870295
bra-r.6
for
103859423
vvi-u.5
for
100252096
ppo-u.5
for
7455620
mtr-u.5
for
25499564
ghi-r.1
for
107891227
ghi-r.1
for
107889475
bna-r.1
for
106401173
bna-r.1
for
106353072
bna-r.1
for
106415087
sot-r.1
for
102600929
cit-r.1
for
102624787
nta-r.1
for
107775427
nta-r.1
for
107784860


Ortholog ID: 8453
Species zma sbi osa tae tae tae hvu bdi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta
Symbol LOC103632101 LOC8063686 LOC4342674 LOC123188638 LOC123052774 LOC123044856 LOC123426147 LOC100839023 AT3G11960 LOC100806799 LOC100799711 LOC101261183 LOC103870295 LOC103859423 LOC100252096 LOC7455620 LOC25499564 LOC107891227 LOC107889475 LOC106401173 LOC106353072 LOC106452512 LOC102600929 LOC102624787 LOC107775427 LOC107784860
Function* splicing factor 3B subunit 3 splicing factor 3B subunit 3 uncharacterized LOC4342674 splicing factor 3B subunit 3 splicing factor 3B subunit 3 splicing factor 3B subunit 3 DNA damage-binding protein 1 splicing factor 3B subunit 3 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein splicing factor 3B subunit 3 splicing factor 3B subunit 3 uncharacterized LOC101261183 splicing factor 3B subunit 3 spliceosome-associated protein 130 A pre-mRNA-splicing factor prp12 uncharacterized LOC7455620 splicing factor 3B subunit 3 splicing factor 3B subunit 3 splicing factor 3B subunit 3 spliceosome-associated protein 130 A-like spliceosome-associated protein 130 A splicing factor 3B subunit 3 pre-mRNA-splicing factor prp12 uncharacterized LOC102624787 uncharacterized LOC107775427 uncharacterized LOC107784860
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 8
gma03040 Spliceosome 3
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma03040 Spliceosome 2
gma03082 ATP-dependent chromatin remodeling 2
gma04712 Circadian rhythm - plant 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly03082 ATP-dependent chromatin remodeling 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03082 ATP-dependent chromatin remodeling 2
bra03440 Homologous recombination 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
bra04120 Ubiquitin mediated proteolysis 2
bra04136 Autophagy - other 2
bra04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04712 Circadian rhythm - plant 2
bna04142 Lysosome 2
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04712 Circadian rhythm - plant 2
bna04142 Lysosome 2
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04712 Circadian rhythm - plant 2
bna04136 Autophagy - other 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 3
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 3
nta03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103632101 8063686 4342674 123188638 123052774 123044856 123426147 100839023 820369 100806799 100799711 101261183 103870295 103859423 100252096 7455620 25499564 107891227 107889475 106401173 106353072 106452512 102600929 102624787 107775427 107784860
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