ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	103633375	formin-like protein 13
zma-r.6	103633375	formin-like protein 13
zma-u.5	103643397	formin-like protein 4
zma-u.5	100272525	uncharacterized LOC100272525
zma-u.5	103626135	formin-like protein 4
sbi-r.1	8078678	formin-like protein 1
sbi-r.1	8065209	formin-like protein 4
sbi-r.1	8081866	formin-like protein 8
osa-u.5	4325107	formin-like protein 1
osa-u.5	4331986	formin-like protein 8
osa-u.5	4343760	formin-like protein 13
tae-r.2	123122207	formin-like protein 15
tae-r.2	123062863	formin-like protein 1
tae-r.2	123044364	formin-like protein 13
hvu-r.1	123399956	formin-like protein 15
hvu-r.1	123445059	formin-like protein 1
bdi-r.1	100825546	formin-like protein 8
bdi-r.1	100834554	formin-like protein 15
bdi-r.1	100838643	formin-like protein 13
ath-u.5	AT2G43800	Actin-binding FH2 (formin homology 2) family protein
ath-u.5	AFH1	formin homology 1
ath-u.5	FH6	formin homolog 6
gma-u.5	100776403	formin-like protein 6
gma-u.5	100786203	formin-like protein 2
gma-u.5	100798670	formin-like protein 6
sly-u.5	101268070	formin-like protein 1
sly-u.5	101260547	formin-like protein 1
sly-u.5	101259597	formin-like protein 6
bra-r.6	103874050	formin-like protein 6
bra-r.6	103866746	formin-like protein 2
bra-r.6	103860284	formin-like protein 1
vvi-u.5	100245626	formin-like protein 1
vvi-u.5	100249049	formin-like protein 6
vvi-u.5	100252716	formin-like protein 1
ppo-u.5	7459949	formin-like protein 2
ppo-u.5	7471130	formin-like protein 1
ppo-u.5	7469365	formin-like protein 1
mtr-u.5	11434954	formin-like protein 6
mtr-u.5	11435547	formin-like protein 1
mtr-u.5	11444093	formin-like protein 2
ghi-r.1	107912501	formin-like protein 1
ghi-r.1	107913280	formin-like protein 6
ghi-r.1	107914580	formin-like protein 2
bna-r.1	125584327	formin-like protein 2
bna-r.1	106360161	formin-like protein 6
bna-r.1	106361814	formin-like protein 1
sot-r.1	102595554	formin-like protein 2
sot-r.1	102591335	formin-like protein 1
sot-r.1	102588979	formin-like protein 6
cit-r.1	102615981	formin-like protein 2
cit-r.1	102607386	formin-like protein 6
cit-r.1	102614784	formin-like protein 1
nta-r.1	107800915	formin-like protein 6
nta-r.1	107761036	formin-like protein 6
nta-r.1	107806367	formin-like protein 1

Top 50 coexpressed genes to 103633375 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103633375 (zma-u.5 coexpression data)

CoexMap"103633375"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0045010 [list] [network] actin nucleation	(31 genes)	IEA
GO:0030036 [list] [network] actin cytoskeleton organization	(96 genes)	IEA

GO CC

GO MF

GO:0051015 [list] [network] actin filament binding

(70 genes)

IEA

Protein

XP_008653303.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 5, cyto_plas 4, extr 1, E.R. 1, cyto 1

(predict for XP_008653303.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_008653303.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 103633375	zma-r.6 for 103633375	zma-u.5 for 103643397	zma-u.5 for 100272525	zma-u.5 for 103626135	sbi-r.1 for 8078678	sbi-r.1 for 8065209	sbi-r.1 for 8081866	osa-u.5 for 4325107	osa-u.5 for 4331986	osa-u.5 for 4343760	tae-r.2 for 123122207	tae-r.2 for 123062863	tae-r.2 for 123044364	hvu-r.1 for 123399956	hvu-r.1 for 123445059	bdi-r.1 for 100825546	bdi-r.1 for 100834554	bdi-r.1 for 100838643	ath-u.5 for AT2G43800	ath-u.5 for AFH1	ath-u.5 for FH6	gma-u.5 for 100776403	gma-u.5 for 100786203	gma-u.5 for 100798670	sly-u.5 for 101268070	sly-u.5 for 101260547	sly-u.5 for 101259597	bra-r.6 for 103874050	bra-r.6 for 103866746	bra-r.6 for 103860284	vvi-u.5 for 100245626	vvi-u.5 for 100249049	vvi-u.5 for 100252716	ppo-u.5 for 7459949	ppo-u.5 for 7471130	ppo-u.5 for 7469365	mtr-u.5 for 11434954	mtr-u.5 for 11435547	mtr-u.5 for 11444093	ghi-r.1 for 107912501	ghi-r.1 for 107913280	ghi-r.1 for 107914580	bna-r.1 for 125584327	bna-r.1 for 106360161	bna-r.1 for 106361814	sot-r.1 for 102595554	sot-r.1 for 102591335	sot-r.1 for 102588979	cit-r.1 for 102615981	cit-r.1 for 102607386	cit-r.1 for 102614784	nta-r.1 for 107800915	nta-r.1 for 107761036	nta-r.1 for 107806367

Ortholog

Ortholog ID: 706

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

AFH1

FH6

Function^*

formin-like protein 4

formin-like protein 8

Formin-like protein 1

formin-like protein 1

formin-like protein 13

formin-like protein 15

formin-like protein 8

formin-like protein 13

formin-like protein 15

formin-like protein 13

formin-like protein 15

formin-like protein 1

formin-like protein 8

formin-like protein 13

formin-like protein 1

Actin-binding FH2 (formin homology 2) family protein

formin homology 1

formin homolog 6

formin-like protein 2

formin-like protein 1

formin-like protein 6

formin-like protein 1

formin-like protein 6

formin-like protein 1

formin-like protein 2

formin-like protein 1

formin-like protein 6

formin-like protein 1

formin-like protein 2

formin-like protein 1

formin-like protein 6

formin-like protein 1

formin-like protein 6

formin-like protein 2

formin-like protein 1

formin-like protein 6

formin-like protein 1

formin-like protein 2

formin-like protein 6

formin-like protein 1

formin-like protein 6

formin-like protein 2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01200	Carbon metabolism	6
zma01230	Biosynthesis of amino acids	5
zma00710	Carbon fixation by Calvin cycle	5
zma00030	Pentose phosphate pathway	3
zma00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	5
osa03040	Spliceosome	3
osa03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	3
gma02010	ABC transporters	2
gma04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03015	mRNA surveillance pathway	2
bra04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04145	Phagosome	3
vvi04517	IgSF CAM signaling	3
vvi04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	2
nta00941	Flavonoid biosynthesis	2
nta00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

103643397

103632209

100192542

8078678

8058382

8054851

4331986

4343760

4347588

123122207

123044364

123112732

123399956

123445059

100825546

100838643

100841717

818984

822136

836883

100786203

100801837

100806929

101260547

101254726

101268261

103874050

103860284

103860063

100245626

100249049

100252716

7459949

7471130

7469365

11435547

25493532

25500744

107912501

107913280

107888696

106360161

106388343

106435916

102588979

102589453

102600023

102615981

102607386

102614784

107800915

107831355

107815696

The preparation time of this page was 0.2 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	5	3	3	3	2	3	3	3	3	3	3	3	3	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103633375 (zma-u.5 coexpression data)

Top 50 enrichment test to 103633375 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**