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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103636848   pentatricopeptide repeat-containing protein At5g66520 
 zma-r.6   103636848   pentatricopeptide repeat-containing protein At5g66520 
 osa-u.5   9267687   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 ath-u.5   AT5G43790   Pentatricopeptide repeat (PPR) superfamily protein 
 sly-u.5   101251308   pentatricopeptide repeat-containing protein At5g43790 
 vvi-u.5   100264947   pentatricopeptide repeat-containing protein At5g43790 
 mtr-u.5   11440274   pentatricopeptide repeat-containing protein At5g43790 

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Top 50 coexpressed genes to 103636848 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103636848 (zma-u.5 coexpression data)

CoexMap"103636848"


zmaLOC103636848 | Entrez gene ID : 103636848    
Species zma osa ath sly vvi mtr sot hvu tae cit sbi ppo gma ghi cre bna nta bdi bra
Paralog 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (350 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (807 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein XP_020398394.1 [sequence] [blastp]
XP_020398395.1 [sequence] [blastp]
XP_020398396.1 [sequence] [blastp]
XP_035817541.1 [sequence] [blastp]
XP_035817542.1 [sequence] [blastp]
XP_035817543.1 [sequence] [blastp]
XP_035817544.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  vacu 1,  E.R._vacu 1,  chlo 1,  nucl 1  (predict for XP_020398394.1)
cyto 7,  vacu 1,  E.R._vacu 1,  chlo 1,  nucl 1  (predict for XP_020398395.1)
cyto 7,  vacu 1,  E.R._vacu 1,  chlo 1,  nucl 1  (predict for XP_020398396.1)
cyto 7,  vacu 1,  E.R._vacu 1,  chlo 1,  nucl 1  (predict for XP_035817541.1)
cyto 7,  vacu 1,  E.R._vacu 1,  chlo 1,  nucl 1  (predict for XP_035817542.1)
cyto 7,  vacu 1,  E.R._vacu 1,  chlo 1,  nucl 1  (predict for XP_035817543.1)
cyto 7,  vacu 1,  E.R._vacu 1,  chlo 1,  nucl 1  (predict for XP_035817544.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_020398394.1)
mito 3  (predict for XP_020398395.1)
mito 3  (predict for XP_020398396.1)
mito 3  (predict for XP_035817541.1)
mito 3  (predict for XP_035817542.1)
mito 3  (predict for XP_035817543.1)
mito 3  (predict for XP_035817544.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103636848

.
zma-r.6
for
103636848

.
osa-u.5
for
9267687

.
ath-u.5
for
AT5G43790

.
sly-u.5
for
101251308

.
vvi-u.5
for
100264947

.
mtr-u.5
for
11440274

.


Ortholog ID: 9138
Species ath sly zma bra vvi mtr hvu hvu ghi ghi bna sot nta nta
Symbol AT5G43790 LOC101251308 LOC103636848 LOC103827952 LOC100264947 LOC11440274 LOC123442860 LOC123450365 LOC107929130 LOC107928457 LOC125589569 LOC102604877 LOC107760708 LOC107823102
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g43790-like pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790-like pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790-like pentatricopeptide repeat-containing protein At5g43790
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
bra03040 Spliceosome 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834401 101251308 103636848 103827952 100264947 11440274 123442860 123450365 107929130 107928457 125589569 102604877 107760708 107823102
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