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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1  107760708  pentatricopeptide repeat-containing protein At5g43790-like 
 sly-u.5  101251308  pentatricopeptide repeat-containing protein At5g43790 
 ath-u.5  AT5G43790  Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5  100264947  pentatricopeptide repeat-containing protein At5g43790 
 mtr-u.5  11440274  pentatricopeptide repeat-containing protein At5g43790 
 osa-u.5  9267687  pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 zma-u.5  103636848  pentatricopeptide repeat-containing protein At5g66520 

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Top 50 coexpressed genes to 107760708 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107760708 (nta-r.1 coexpression data)

CoexMap"107760708"


ntaLOC107760708 | Entrez gene ID : 107760708
Species nta sly ath vvi mtr osa zma bdi hvu bra cit gma bna ppo sbi ghi sot cre tae
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2210 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016434295.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  plas 4,  mito 1  (predict for XP_016434295.2)
Subcellular
localization
TargetP
other 3  (predict for XP_016434295.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

nta-r.1
for
107760708


sly-u.5
for
101251308


ath-u.5
for
AT5G43790


vvi-u.5
for
100264947


mtr-u.5
for
11440274


osa-u.5
for
9267687


zma-u.5
for
103636848



Ortholog ID: 9138
Species nta nta sly sot ath bra vvi mtr ghi ghi bna zma hvu hvu
Symbol LOC107760708 LOC107823102 LOC101251308 LOC102604877 AT5G43790 LOC103827952 LOC100264947 LOC11440274 LOC107929130 LOC107928457 LOC125589569 LOC103636848 LOC123442860 LOC123450365
Function* pentatricopeptide repeat-containing protein At5g43790-like pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790-like pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g43790-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
bra03040 Spliceosome 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107760708 107823102 101251308 102604877 834401 103827952 100264947 11440274 107929130 107928457 125589569 103636848 123442860 123450365
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