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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103641252   pentatricopeptide repeat-containing protein, mitochondrial-like 
 zma-r.6   103641252   pentatricopeptide repeat-containing protein, mitochondrial-like 
 sbi-r.1   8080860   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 osa-u.5   4344730   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 tae-r.2   123165652   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 tae-r.2   123155861   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 hvu-r.1   123408341   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 bdi-r.1   100846006   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 ath-u.5   AT1G07590   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100783568   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 sly-u.5   101261926   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 vvi-u.5   100260459   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 ppo-u.5   7488118   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 mtr-u.5   25487882   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 ghi-r.1   107940029   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 bna-r.1   106419970   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 sot-r.1   102579095   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 cit-r.1   102617719   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 nta-r.1   107796249   pentatricopeptide repeat-containing protein At1g07590, mitochondrial-like 
 nta-r.1   107815875   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 

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Top 50 coexpressed genes to 103641252 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103641252 (zma-u.5 coexpression data)

CoexMap"103641252"


zmaLOC103641252 | Entrez gene ID : 103641252      
Species zma sbi osa tae hvu bdi ath gma sly vvi ppo mtr ghi bna sot cit nta bra cre
Paralog 2 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (746 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein XP_008662837.1 [sequence] [blastp]
XP_008662838.1 [sequence] [blastp]
XP_008662839.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  mito 2,  cyto_nucl 2  (predict for XP_008662837.1)
cyto 5,  nucl 3,  chlo 1,  mito 1,  golg 1,  chlo_mito 1  (predict for XP_008662838.1)
cyto 5,  chlo 1,  nucl 1,  mito 1,  pero 1,  golg 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_008662839.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_008662837.1)
other 8,  mito 3  (predict for XP_008662838.1)
other 9  (predict for XP_008662839.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103641252
zma-r.6
for
103641252
sbi-r.1
for
8080860
osa-u.5
for
4344730
tae-r.2
for
123165652
tae-r.2
for
123155861
hvu-r.1
for
123408341
bdi-r.1
for
100846006
ath-u.5
for
AT1G07590
gma-u.5
for
100783568
sly-u.5
for
101261926
vvi-u.5
for
100260459
ppo-u.5
for
7488118
mtr-u.5
for
25487882
ghi-r.1
for
107940029
bna-r.1
for
106419970
sot-r.1
for
102579095
cit-r.1
for
102617719
nta-r.1
for
107796249
nta-r.1
for
107815875


Ortholog ID: 11771
Species zma sbi osa tae tae hvu bdi ath gma sly vvi ppo mtr ghi bna sot cit nta nta
Symbol LOC103641252 LOC8080860 LOC4344730 LOC123165652 LOC123155861 LOC123408341 LOC100846006 AT1G07590 LOC100783568 LOC101261926 LOC100260459 LOC7488118 LOC25487882 LOC107940029 LOC106419970 LOC102579095 LOC102617719 LOC107796249 LOC107815875
Function* pentatricopeptide repeat-containing protein, mitochondrial-like pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial-like pentatricopeptide repeat-containing protein At1g07590, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 5
tae00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103641252 8080860 4344730 123165652 123155861 123408341 100846006 837272 100783568 101261926 100260459 7488118 25487882 107940029 106419970 102579095 102617719 107796249 107815875
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