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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7488118   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 ppo-r.4   7488118   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 ppo-m.4   7488118   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 gma-u.5   100783568   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 mtr-u.5   25487882   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 ath-u.5   AT1G07590   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100260459   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 sly-u.5   101261926   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 osa-u.5   4344730   pentatricopeptide repeat-containing protein At1g07590, mitochondrial 
 zma-u.5   103641252   pentatricopeptide repeat-containing protein, mitochondrial-like 

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Top 50 coexpressed genes to 7488118 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7488118 (ppo-u.5 coexpression data)

CoexMap"7488118"


ppoLOC7488118 | Entrez gene ID : 7488118    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (675 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002314181.3 [sequence] [blastp]
XP_024463725.2 [sequence] [blastp]
XP_024463727.2 [sequence] [blastp]
XP_024463728.2 [sequence] [blastp]
XP_024463729.2 [sequence] [blastp]
XP_024463730.2 [sequence] [blastp]
XP_024463731.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  extr 1  (predict for XP_002314181.3)
chlo 4,  mito 4,  extr 1  (predict for XP_024463725.2)
chlo 4,  mito 4,  extr 1  (predict for XP_024463727.2)
chlo 4,  mito 4,  extr 1  (predict for XP_024463728.2)
chlo 4,  mito 4,  extr 1  (predict for XP_024463729.2)
chlo 4,  mito 4,  extr 1  (predict for XP_024463730.2)
nucl 5,  cyto 4,  chlo 1,  cysk 1  (predict for XP_024463731.2)
Subcellular
localization
TargetP
mito 9  (predict for XP_002314181.3)
mito 9  (predict for XP_024463725.2)
mito 9  (predict for XP_024463727.2)
mito 9  (predict for XP_024463728.2)
mito 9  (predict for XP_024463729.2)
mito 9  (predict for XP_024463730.2)
mito 4,  other 3  (predict for XP_024463731.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7488118

.
ppo-r.4
for
7488118

.
ppo-m.4
for
7488118

.
gma-u.5
for
100783568

.
mtr-u.5
for
25487882

.
ath-u.5
for
AT1G07590

.
vvi-u.5
for
100260459

.
sly-u.5
for
101261926

.
osa-u.5
for
4344730

.
zma-u.5
for
103641252

.


Ortholog ID: 11771
Species ath gma sly osa zma vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta nta
Symbol AT1G07590 LOC100783568 LOC101261926 LOC4344730 LOC103641252 LOC100260459 LOC7488118 LOC25487882 LOC123155861 LOC123408341 LOC107940029 LOC106419970 LOC8080860 LOC102579095 LOC102617719 LOC100846006 LOC107796249 LOC107815875
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein, mitochondrial-like pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial pentatricopeptide repeat-containing protein At1g07590, mitochondrial-like pentatricopeptide repeat-containing protein At1g07590, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837272 100783568 101261926 4344730 103641252 100260459 7488118 25487882 123155861 123408341 107940029 106419970 8080860 102579095 102617719 100846006 107796249 107815875
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